Bioc-devel - July 2021 - Thread View

[Bioc-devel] Windows Not Connected to Internet?

1 msg Jul 30

Margaret Linan Windows Not Connected to Internet? Jul 30, 2021

[Bioc-devel] BiocFileCache Caching ERROR on devel builders

2 msgs Jul 30

Shepherd, Lori BiocFileCache Caching ERROR on devel builders Jul 30, 2021

Gavin Lloyd BiocFileCache Caching ERROR on devel builders Jul 30, 2021

[Bioc-devel] Regarding package nanotatoR

1 msg Jul 30

Bhattacharya, Surajit Regarding package nanotatoR Jul 30, 2021

[Bioc-devel] biocViews - Spatial

2 msgs Jul 30

Lukas Weber biocViews - Spatial Jul 29, 2021

Shepherd, Lori biocViews - Spatial Jul 30, 2021

[Bioc-devel] Bioconductor package DaMiRseq

7 msgs Jul 30

Nitesh Turaga Bioconductor package DaMiRseq Jul 27, 2021

Mattia Chiesa R: Bioconductor package DaMiRseq Jul 27, 2021

Marcel Ramos EXTERNAL: R: Bioconductor package DaMiRseq Jul 27, 2021

Mattia Chiesa R: EXTERNAL: R: Bioconductor package DaMiRseq Jul 28, 2021

Mattia Chiesa R: EXTERNAL: R: Bioconductor package DaMiRseq Jul 29, 2021

Nitesh Turaga EXTERNAL: R: Bioconductor package DaMiRseq Jul 29, 2021

Mattia Chiesa R: EXTERNAL: R: Bioconductor package DaMiRseq Jul 30, 2021

[Bioc-devel] BiocChallenges: BioPlex protein-protein interactions & BugSigDB microbiome signatures

1 msg Jul 30

Geistlinger, Ludwig BiocChallenges: BioPlex protein-protein interactions & BugSigDB microbiome signatures Jul 30, 2021

[Bioc-devel] Problem with updated cache on Bioc builders

3 msgs Jul 29

Lukas Weber Problem with updated cache on Bioc builders Jul 29, 2021

Shepherd, Lori Problem with updated cache on Bioc builders Jul 29, 2021

Lukas Weber Problem with updated cache on Bioc builders Jul 29, 2021

[Bioc-devel] Pushing an update to already released package

2 msgs Jul 29

Oluwafemi OLUSOJI Pushing an update to already released package Jul 29, 2021

Nitesh Turaga Pushing an update to already released package Jul 29, 2021

[Bioc-devel] Could anyone help me to fix it?

2 msgs Jul 28

Guo Kai Could anyone help me to fix it? Jul 27, 2021

Vincent Carey Could anyone help me to fix it? Jul 28, 2021

[Bioc-devel] pre-receive hook declined

9 msgs Jul 27

Michael Love pre-receive hook declined Jun 30, 2021

Nitesh Turaga pre-receive hook declined Jul 1, 2021

Michael Love pre-receive hook declined Jul 1, 2021

Victor Yuan pre-receive hook declined Jul 2, 2021

Clay Wright pre-receive hook declined Jul 27, 2021

Nitesh Turaga pre-receive hook declined Jul 27, 2021

Shepherd, Lori pre-receive hook declined Jul 27, 2021

Vincent Carey pre-receive hook declined Jul 27, 2021

Clay Wright pre-receive hook declined Jul 27, 2021

[Bioc-devel] R: Bioconductor package DaMiRseq

3 msgs Jul 27

Mattia Chiesa R: Bioconductor package DaMiRseq Jul 27, 2021

Nitesh Turaga Bioconductor package DaMiRseq Jul 27, 2021

Mattia Chiesa R: Bioconductor package DaMiRseq Jul 27, 2021

[Bioc-devel] BentoBox and BentoBoxData git.bioconductor repositories

4 msgs Jul 27

Nitesh Turaga BentoBox and BentoBoxData git.bioconductor repositories Jul 26, 2021

Kramer, Nicole Emma BentoBox and BentoBoxData git.bioconductor repositories Jul 26, 2021

Nitesh Turaga BentoBox and BentoBoxData git.bioconductor repositories Jul 26, 2021

Kramer, Nicole Emma BentoBox and BentoBoxData git.bioconductor repositories Jul 27, 2021

[Bioc-devel] knitr ERROR on Biocondcutor builders

1 msg Jul 26

Shepherd, Lori knitr ERROR on Biocondcutor builders Jul 26, 2021

[Bioc-devel] BentoBox and BentoBoxData git.bioconductor repositories

2 msgs Jul 26

Kramer, Nicole Emma BentoBox and BentoBoxData git.bioconductor repositories Jul 24, 2021

Nitesh Turaga BentoBox and BentoBoxData git.bioconductor repositories Jul 26, 2021

[Bioc-devel] MOFA2 build error

2 msgs Jul 26

Britta Velten MOFA2 build error Jul 25, 2021

Vincent Carey MOFA2 build error Jul 26, 2021

[Bioc-devel] Landing page of the deprecated MOFA package

1 msg Jul 25

Britta Velten Landing page of the deprecated MOFA package Jul 25, 2021

[Bioc-devel] Error with Windows Build

1 msg Jul 25

Margaret Linan Error with Windows Build Jul 25, 2021

[Bioc-devel] Landing page of the deprecated MOFA package

3 msgs Jul 23

Velten, Britta Landing page of the deprecated MOFA package Jul 23, 2021

Shepherd, Lori Landing page of the deprecated MOFA package Jul 23, 2021

[Bioc-devel] upstream has disappeared

2 msgs Jul 22

Michael Shapiro upstream has disappeared Jul 22, 2021

Shepherd, Lori upstream has disappeared Jul 22, 2021

[Bioc-devel] Maintainer change

3 msgs Jul 19

Mikhail Dozmorov Maintainer change Jul 18, 2021

Nitesh Turaga Maintainer change Jul 19, 2021

Mikhail Dozmorov Maintainer change Jul 19, 2021

[Bioc-devel] Git credentials

3 msgs Jul 15

Geistlinger, Ludwig Git credentials Jul 15, 2021

Nitesh Turaga Git credentials Jul 15, 2021

Geistlinger, Ludwig Git credentials Jul 15, 2021

[Bioc-devel] reacVcf(remoteFile, "hg19", region) fails in VariantAnnotation 1.39.0 (and friends), works with 1.38.0

3 msgs Jul 14

Paul Shannon reacVcf(remoteFile, "hg19", region) fails in VariantAnnotation 1.39.0 (and friends), works with 1.38.0 Jul 12, 2021

Martin Morgan reacVcf(remoteFile, "hg19", region) fails in VariantAnnotation 1.39.0 (and friends), works with 1.38.0 Jul 13, 2021

Paul Shannon reacVcf(remoteFile, "hg19", region) fails in VariantAnnotation 1.39.0 (and friends), works with 1.38.0 Jul 14, 2021

[Bioc-devel] Updating stable release

3 msgs Jul 14

margaret linan Updating stable release Jul 14, 2021

James W. MacDonald Updating stable release Jul 14, 2021

Nitesh Turaga Updating stable release Jul 14, 2021

[Bioc-devel] Updating stable release

2 msgs Jul 14

margaret linan Updating stable release Jul 14, 2021

Shepherd, Lori Updating stable release Jul 14, 2021

[Bioc-devel] Getting ready for package submission, running into a couple of errors/warnings that I can't figure out

3 msgs Jul 13

Wight, Andrew E. Getting ready for package submission, running into a couple of errors/warnings that I can't figure out Jul 12, 2021

Nitesh Turaga Getting ready for package submission, running into a couple of errors/warnings that I can't figure out Jul 12, 2021

Vincent Carey Getting ready for package submission, running into a couple of errors/warnings that I can't figure out Jul 13, 2021

[Bioc-devel] Call for Community Volunteered Package Reviewers

1 msg Jul 12

Shepherd, Lori Call for Community Volunteered Package Reviewers Jul 12, 2021

[Bioc-devel] Usage of donttest{} in examples

2 msgs Jul 12

Fabricio de Almeida Usage of donttest{} in examples Jul 9, 2021

Shepherd, Lori Usage of donttest{} in examples Jul 12, 2021

[Bioc-devel] riesling1: some package that install, build, check, and build bin OK, shown in red

4 msgs Jul 7

Ramon Diaz-Uriarte riesling1: some package that install, build, check, and build bin OK, shown in red Jul 7, 2021

Shepherd, Lori riesling1: some package that install, build, check, and build bin OK, shown in red Jul 7, 2021

Martin Morgan riesling1: some package that install, build, check, and build bin OK, shown in red Jul 7, 2021

Ramon Diaz-Uriarte riesling1: some package that install, build, check, and build bin OK, shown in red Jul 7, 2021

[Bioc-devel] Replicating Windows build error for BioC package submission

2 msgs Jul 6

Benjamin Story Replicating Windows build error for BioC package submission Jul 5, 2021

Hervé Pagès Replicating Windows build error for BioC package submission Jul 6, 2021

[Bioc-devel] Question on copyright in Bioc vignette

5 msgs Jul 6

[Bioc-devel] Reducing number of dependencies

2 msgs Jul 6

David Jimenez-Morales Reducing number of dependencies Jul 5, 2021

顾祖光 Reducing number of dependencies Jul 6, 2021

[Bioc-devel] Package did not update after push

3 msgs Jul 5

Fabricio de Almeida Package did not update after push Jul 5, 2021

Vincent Carey Package did not update after push Jul 5, 2021

Fabricio de Almeida Package did not update after push Jul 5, 2021

[Bioc-devel] configure did not have execute permissions: corrected

3 msgs Jul 5

Davide Corso configure did not have execute permissions: corrected Jul 1, 2021

Oliver Voogd configure did not have execute permissions: corrected Jul 3, 2021

Davide Corso configure did not have execute permissions: corrected Jul 5, 2021

[Bioc-devel] Build error

2 msgs Jul 3

margaret linan Build error Jul 3, 2021

Vincent Carey Build error Jul 3, 2021

[Bioc-devel] Unable to use lldb debugger

5 msgs Jul 2

Hani Habra Unable to use lldb debugger Jul 1, 2021

Shian Su Unable to use lldb debugger Jul 1, 2021

Dolors Pelegri Unable to use lldb debugger Jul 1, 2021

Hani Habra Unable to use lldb debugger Jul 2, 2021

Martin Morgan Unable to use lldb debugger Jul 2, 2021

[Bioc-devel] lack of ability to push changes to new bioc repo via git

2 msgs Jul 1

Benjamin Story lack of ability to push changes to new bioc repo via git Jul 1, 2021

Nitesh Turaga lack of ability to push changes to new bioc repo via git Jul 1, 2021

[Bioc-devel] Running R (and R with debugger) from Command Line

1 msg Jul 1

Hani Habra Running R (and R with debugger) from Command Line Jul 1, 2021

Bioc-devel July 2021