Bioc-devel - March 2024 - Thread View

[Bioc-devel] Package size issue

4 msgs Mar 29

G@briei@Viii@mii m@iii@g oii mdc-berii@@de Package size issue Mar 28, 2024

Ali Sajid Imami Package size issue Mar 28, 2024

Lluís Revilla Package size issue Mar 29, 2024

Kevin Coombes Package size issue Mar 29, 2024

[Bioc-devel] Deadline Extended: BioC2024 Abstracts & Sticker Contest – April 1st

2 msgs Mar 29

Maria.Doyle Deadline Extended: BioC2024 Abstracts & Sticker Contest – April 1st Mar 22, 2024

Maria.Doyle Final Reminder: BioC2024 Abstract & Sticker Contest Deadline April 1st Mar 29, 2024

[Bioc-devel] Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available

8 msgs Mar 28

Shepherd, Lori Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

Tim Triche, Jr. Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

Vincent Carey Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

James W. MacDonald Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

Tim Triche, Jr. Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

James W. MacDonald Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

Robert Castelo Bioconductor 3.19 db0s, OrgDbs, and TxDbs now available Mar 28, 2024

[Bioc-devel] Issue with lme4/Matrix in BioC 3.19 R 4.4

1 msg Mar 28

Hoffman, Gabriel Issue with lme4/Matrix in BioC 3.19 R 4.4 Mar 28, 2024

[Bioc-devel] CuvierLab -Request to add maintainers for HicAggR

3 msgs Mar 28

Olivier Cuvier CuvierLab -Request to add maintainers for HicAggR Mar 27, 2024

Shepherd, Lori CuvierLab -Request to add maintainers for HicAggR Mar 28, 2024

Olivier Cuvier CuvierLab -Request to add maintainers for HicAggR Mar 28, 2024

[Bioc-devel] fixing deltaCaptureC

2 msgs Mar 27

Michael Shapiro fixing deltaCaptureC Mar 27, 2024

Jennifer Wokaty fixing deltaCaptureC Mar 27, 2024

[Bioc-devel] about deprecate package DNABarcode

6 msgs Mar 27

Sun Wenjie about deprecate package DNABarcode Mar 12, 2024

Shepherd, Lori about deprecate package DNABarcode Mar 12, 2024

Pedro Sánchez Sánchez about deprecate package DNABarcode Mar 20, 2024

Sun Wenjie about deprecate package DNABarcode Mar 27, 2024

Pedro Sánchez Sánchez about deprecate package DNABarcode Mar 27, 2024

Shepherd, Lori about deprecate package DNABarcode Mar 27, 2024

[Bioc-devel] Commit access for additional developer on missMethyl package

2 msgs Mar 27

Jovana Maksimovic Commit access for additional developer on missMethyl package Mar 26, 2024

Shepherd, Lori Commit access for additional developer on missMethyl package Mar 27, 2024

[Bioc-devel] Important Bioconductor Release Deadlines

1 msg Mar 26

Shepherd, Lori Important Bioconductor Release Deadlines Mar 26, 2024

[Bioc-devel] Request to add maintainers for diffHic

2 msgs Mar 25

Aaron Lun Request to add maintainers for diffHic Mar 25, 2024

Shepherd, Lori Request to add maintainers for diffHic Mar 25, 2024

[Bioc-devel] CNV Panelizer Stop Deprecation

1 msg Mar 24

Thomas Wolf CNV Panelizer Stop Deprecation Mar 24, 2024

[Bioc-devel] Nominations for Bioconductor Awards 2024

1 msg Mar 22

Shepherd, Lori Nominations for Bioconductor Awards 2024 Mar 22, 2024

[Bioc-devel] New Package Submission Deadline today for Bioconductor 3.19

1 msg Mar 22

Shepherd, Lori New Package Submission Deadline today for Bioconductor 3.19 Mar 22, 2024

[Bioc-devel] Unable to update Bioconductor Git Credentials

2 msgs Mar 20

Małgorzata Oleś Unable to update Bioconductor Git Credentials Mar 19, 2024

Shepherd, Lori Unable to update Bioconductor Git Credentials Mar 20, 2024

[Bioc-devel] muleaData problems reported in the Build/check report for BioC 3.19 experimental data

3 msgs Mar 20

Eszter Ari muleaData problems reported in the Build/check report for BioC 3.19 experimental data Mar 20, 2024

Mike Smith muleaData problems reported in the Build/check report for BioC 3.19 experimental data Mar 20, 2024

Eszter Ari muleaData problems reported in the Build/check report for BioC 3.19 experimental data Mar 20, 2024

[Bioc-devel] Bioconductor Git Credentials

5 msgs Mar 18

Seiler, Christof (DACS) Bioconductor Git Credentials Mar 18, 2024

Shepherd, Lori Bioconductor Git Credentials Mar 18, 2024

Seiler, Christof (DACS) Bioconductor Git Credentials Mar 18, 2024

Shepherd, Lori Bioconductor Git Credentials Mar 18, 2024

Seiler, Christof (DACS) Bioconductor Git Credentials Mar 18, 2024

[Bioc-devel] "invalid connection" when building vignette - Windows only

4 msgs Mar 18

Matteo Tiberti "invalid connection" when building vignette - Windows only Mar 15, 2024

Ramos Perez, Marcel EXTERNAL: "invalid connection" when building vignette - Windows only Mar 15, 2024

Matteo Tiberti EXTERNAL: "invalid connection" when building vignette - Windows only Mar 18, 2024

Ramos Perez, Marcel EXTERNAL: "invalid connection" when building vignette - Windows only Mar 18, 2024

[Bioc-devel] Repitools Bioconductor

2 msgs Mar 18

Mark D. Robinson Repitools Bioconductor Mar 17, 2024

CoreTeam Bioconductor Repitools Bioconductor Mar 18, 2024

[Bioc-devel] ExperimentHub packages offline

1 msg Mar 16

Laurent Gatto ExperimentHub packages offline Mar 16, 2024

[Bioc-devel] xcms error with R CMD check "checking loading without being on the library search path"

3 msgs Mar 14

Rainer Johannes xcms error with R CMD check "checking loading without being on the library search path" Mar 13, 2024

Mike Smith xcms error with R CMD check "checking loading without being on the library search path" Mar 14, 2024

Rainer Johannes xcms error with R CMD check "checking loading without being on the library search path" Mar 14, 2024

[Bioc-devel] Reminder: BioC2024 Abstract Submission and Sticker Design Contest Deadlines Approaching

1 msg Mar 14

Maria.Doyle Reminder: BioC2024 Abstract Submission and Sticker Design Contest Deadlines Approaching Mar 14, 2024

[Bioc-devel] DataFrame conversion

2 msgs Mar 13

Daniel Schulz DataFrame conversion Mar 13, 2024

Ramos Perez, Marcel DataFrame conversion Mar 13, 2024

[Bioc-devel] Failed to activate account for Bioconductor git credentials

1 msg Mar 13

Małgorzata Oleś Failed to activate account for Bioconductor git credentials Mar 13, 2024

[Bioc-devel] AnnotationHub corrupted cache on nebbiolo1

3 msgs Mar 13

Matteo Tiberti AnnotationHub corrupted cache on nebbiolo1 Mar 11, 2024

Shepherd, Lori AnnotationHub corrupted cache on nebbiolo1 Mar 11, 2024

Matteo Tiberti AnnotationHub corrupted cache on nebbiolo1 Mar 13, 2024

[Bioc-devel] Unable to install "spoon" package due to R version 4.4 dependence

3 msgs Mar 12

Kinnary Shah Unable to install "spoon" package due to R version 4.4 dependence Mar 11, 2024

James W. MacDonald Unable to install "spoon" package due to R version 4.4 dependence Mar 11, 2024

Shepherd, Lori Unable to install "spoon" package due to R version 4.4 dependence Mar 12, 2024

[Bioc-devel] Deprecate pwOmics package

2 msgs Mar 12

Torsten Schoeps Deprecate pwOmics package Mar 12, 2024

Shepherd, Lori Deprecate pwOmics package Mar 12, 2024

[Bioc-devel] un-deprecation gscreend

3 msgs Mar 12

Katharina Imkeller un-deprecation gscreend Mar 11, 2024

Shepherd, Lori un-deprecation gscreend Mar 11, 2024

Katharina Imkeller un-deprecation gscreend Mar 12, 2024

[Bioc-devel] Important Bioconductor Release Deadlines

1 msg Mar 11

Shepherd, Lori Important Bioconductor Release Deadlines Mar 11, 2024

[Bioc-devel] Bioconductor Devel Build Machines Set to Daily Build Schedule, Release Set to MWF

1 msg Mar 7

Jennifer Wokaty Bioconductor Devel Build Machines Set to Daily Build Schedule, Release Set to MWF Mar 7, 2024

[Bioc-devel] [EXTERN] Re: R package on Github uses Bioconductor depenencies and cant be installed.

2 msgs Mar 7

Ruff, Sergej R package on Github uses Bioconductor depenencies and cant be installed. Mar 7, 2024

Shepherd, Lori R package on Github uses Bioconductor depenencies and cant be installed. Mar 7, 2024

[Bioc-devel] Access rights for simPIC repository, git fetch error

2 msgs Mar 7

Sagrika Chugh Access rights for simPIC repository, git fetch error Mar 7, 2024

Shepherd, Lori Access rights for simPIC repository, git fetch error Mar 7, 2024

[Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

6 msgs Mar 6

Gábor Csárdi Possible https://code.bioconductor.org SSL certificate issue Mar 5, 2024

Spencer Nystrom Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

Mike Smith Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

Gábor Csárdi Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

Robert M. Flight Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

[Bioc-devel] Having problems pushing changes to Bioconductor...

4 msgs Mar 6

Paul Brennan Having problems pushing changes to Bioconductor... Mar 6, 2024

Shepherd, Lori Having problems pushing changes to Bioconductor... Mar 6, 2024

Paul Brennan Having problems pushing changes to Bioconductor... Mar 6, 2024

Shepherd, Lori Having problems pushing changes to Bioconductor... Mar 6, 2024

[Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

3 msgs Mar 6

Anestis Gkanogiannis Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

Gábor Csárdi Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

Robert M. Flight Possible https://code.bioconductor.org SSL certificate issue Mar 6, 2024

[Bioc-devel] Bioconductor 3.19 Release Schedule

1 msg Mar 5

Shepherd, Lori Bioconductor 3.19 Release Schedule Mar 5, 2024

[Bioc-devel] BioC2024 Registration and Sticker Contest Now Open!

1 msg Mar 1

Maria.Doyle BioC2024 Registration and Sticker Contest Now Open! Mar 1, 2024

[Bioc-devel] Fw: MungeSumstats Bioconductor

1 msg Mar 1

Hervé Pagès MungeSumstats Bioconductor Mar 1, 2024

Bioc-devel March 2024