no answers yet? would it work to put your matrices as separate assays in a
SummarizedExperiment?
as long as they are conformant in dimensions and dimnames I think that
would work. That
SummarizedExperiment would then work well in an MAE.
On Mon, Oct 23, 2017 at 1:00 PM, Francesco Napolitano <franapoli at gmail.com
Hi,
I'm trying to build a MultiAssayExperiment. However, in my case each
assay should ideally include two matrices: one with a statistic and
another one with the corresponding p-value. I'm currently managing
each of them simply as a list of two matrices, but assay class expects
table-like data. I must also be able to quickly extract entire rows or
columns from each matrix.
Is there a suitable way to model this into a MultiAssayExperiment?
Thank you,
Francesco