[Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it
Yes what you described is correct and why the ERROR is occurring. So at the next Bioconductor release (3.12) you will have a RELEASE_3_12 branch that Bioconductor will created for Bioc 3.12 commits and the master branch will continue to link to our devel branch. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bhagwat, Aditya <Aditya.Bhagwat at mpi-bn.mpg.de>
Sent: Thursday, June 11, 2020 3:07 PM
To: Shepherd, Lori <Lori.Shepherd at RoswellPark.org>; bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: RE: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it
Sent: Thursday, June 11, 2020 3:07 PM
To: Shepherd, Lori <Lori.Shepherd at RoswellPark.org>; bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: RE: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it
Thankyou Lori, Nitesh, So you are saying is that * upstream/RELEASE_*_* is created from your end with the next BioC release. * The git error message arises because upstream/RELEASE_3_11 does not exist to copy the contents of (locally created) RELEASE_3_11 into. The points under http://bioconductor.org/developers/how-to/git/faq/<http://secure-web.cisco.com/1jV03DzbYYI4ojCV090DnNjqLbd4WnU6ykMByn7ZvEc4pjDZ3pZfU9O7PCwT0JiwxzaaLJGR1MYGDAlCp8w2VSiOAbz_QRBUg_9GA3LQAXlIvPipEiGYuTYFRgIKO2cqNLAMgX6Pd92odRIvV-TPX1J2ehnqXTmw1pw4GxI3WwxwEWzFSkUZ1ICrmzNObBXH9ulKRyTQOubGzgi18XC9ctn8ZO8LOVM9TZtMibXR_tmKsHRw9R44-248lV8l79HJN-ZRphPBbZVKKsN9ep-Ez5CpzpunH4NeAM4vBdOuXKwy7XVtfty-tyJLDZnW1MQVuFsccT6asME-j9roYs-PLyCC-ZdGt7gl5NIH5d4FjOJc/http%3A%2F%2Fbioconductor.org%2Fdevelopers%2Fhow-to%2Fgit%2Ffaq%2F> #14 did work for me, but the above explanation makes sense. Thanks! Aditya ________________________________ From: Shepherd, Lori [Lori.Shepherd at RoswellPark.org] Sent: Thursday, June 11, 2020 6:18 PM To: Bhagwat, Aditya; bioc-devel at r-project.org Subject: Re: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it Newly accepted packages are added into devel only. They will be a release branch as soon as the next scheduled Bioconductor release occurs. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Bhagwat, Aditya <Aditya.Bhagwat at mpi-bn.mpg.de> Sent: Thursday, June 11, 2020 12:15 PM To: bioc-devel at r-project.org <bioc-devel at r-project.org> Subject: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it Dear Bioc Core, Thank you for accepting multicrispr on BioC<https://secure-web.cisco.com/1Y5aHfpLYwxVOA6Cj3bxEVuenqe6D8K2mYcqfAmwz6Fi6eyzj9ZL85VY2H0PZrFkpkFbO_w5JIWkUIDUjYSFPRsOWFmm_pDVgAJBRmO1uCb9LgJF5mh_FUnj2zUAPVJbk9HPy9BzwWn8pHCQOyHp9T_xfBrl1tFAkt7ZrYGptTyl0u1HYKnjYTmc-l5OjWQoyG3bIOTfYV1lc_cNItl7XwfDdyx4NkyoksEKEZfvA_2PlrkF8te0_49BJxVw47JVUK1Tjj-F-nuVxx2gAF3nDoPiQl1f5bOcc1zKgTYrgh1x2so6QfUHbqu_M7rEFHBQ9OFgeC30W0bOLRd4YEfu5XA/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%2Fissues%2F1486>. I was going through the instructions on how to sync existing repositories<https://secure-web.cisco.com/1Xe9o5uhiFHsFKbmSBGQuqpBQbV-hql0tIGwW7TBNOQyRT67-xND5I-TSMoVXC2pXrgYxNb-5-sPbt5rOOjgawuDHJv7Y7yJFhVBV51tIj9xSy4Nk-GlEPEtV_1RG79MZbJ5d7LZ82dFp-BZmzPwrjKRAib7x8vphKaRW4qc_q6EIPMOrs282w4JaJxxRd-Jsxi6X_gw41rihMwaTa84WG62bi5im6SkX3hoyYq6qwitZdOiUeNN9FYJHB_VREnXcM16haB2xWae5BwiJJdtuP3Y1T-wW9L0HnO14_bhkOd794PH_lDa0cdICiv2NVJVoaSyYZK93SX5T2wpON1FgO_xhi1D5Z45H163FH75DerE/https%3A%2F%2Fbioconductor.org%2Fdevelopers%2Fhow-to%2Fgit%2Fsync-existing-repositories%2F>. All instructions up to point 9 work. Point 10, however fails, when creating the release branch: $ git checkout -b RELEASE_3_11 upstream/RELEASE_3_11 fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it I wonder what I am doing wrong (seems like it should be something trivial, but I am not seeing it). Thank you for helping! Aditya [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org mailing list https://secure-web.cisco.com/1dD24Fmu9gjmLPt6fORbREp3nCtIbsBT2Cqq9kX7NWPdnENsspbw0obk03UOZoUcHCDqDJWOZ5LqGeBEON5GsAOUcxgLaOIPiHdXbUkUYRI0JJpGgw9gxTbtdNb5tOM-Tcn6oSrOEmurcRssmw-W7BYV3C5hGKbLQi-Ykb7JeZLS-9VgZSsSCiVcRcC12WqKjR0OmBY6UK1bpRAs--1MCuX1a-WnFzbBEIcdBgOf2IDH6hYDxiFUmniKrXYc52F2MYBhX1qSx1zfJDqxP1bPI1d_4A9MTbwsAuGI9764_XDo3xrBlhnd75yY6a0PaYCvwifkIOcQ2KhxLc0TWUamlFg/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.