[Bioc-devel] Cleanup of Bioconductor organization on Github

On Mar 8, 2018, at 11:37 AM, Obenchain, Valerie <Valerie.Obenchain at RoswellPark.org> wrote:

Hi Keegan,

This problem isn't related to the email Nitesh sent below.

Instead it's a matter of us not having a ssh key on file for you. At least we don't have a key for the kdkorthauer user with permissions on the dmrseq package.

Instructions are here

  https://www.bioconductor.org/developers/how-to/git/ <https://www.bioconductor.org/developers/how-to/git/>

the form for submitting keys is here

  https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform <https://docs.google.com/forms/d/e/1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform>

Please use kdkorthauer as your user ID.

Valerie




On 03/08/2018 08:00 AM, Keegan Korthauer wrote:

Hi Nitesh,

I am unable to push to the Bioc remote for my new package dmrseq. When I try to run `git push upstream master`, I get the following error:

```
FATAL: W any packages/dmrseq k.korthauer DENIED by fallthru
(or you mis-spelled the reponame)
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.
```

I?m not sure if this is related to the cleanup, or if there is something I can do on my end. For troubleshooting I checked that I can still push to Bioc remotes for another package of mine (scDD). But it could be that I missed a step when going through the new package workflow. 

Best,
Keegan

------------------------------

Message: 6
Date: Wed, 7 Mar 2018 20:59:39 +0000
From: "Turaga, Nitesh" <Nitesh.Turaga at RoswellPark.org <mailto:Nitesh.Turaga at RoswellPark.org> <mailto:Nitesh.Turaga at RoswellPark.org> <mailto:Nitesh.Turaga at RoswellPark.org>>
To: bioc-devel <bioc-devel at r-project.org <mailto:bioc-devel at r-project.org> <mailto:bioc-devel at r-project.org> <mailto:bioc-devel at r-project.org>>
Subject: [Bioc-devel] Cleanup of Bioconductor organization on Github
Message-ID: <EE6BC0BB-07A3-4E69-87C8-60CF3328A31D at RoswellPark.org <mailto:EE6BC0BB-07A3-4E69-87C8-60CF3328A31D at RoswellPark.org> <mailto:EE6BC0BB-07A3-4E69-87C8-60CF3328A31D at RoswellPark.org> <mailto:EE6BC0BB-07A3-4E69-87C8-60CF3328A31D at RoswellPark.org>>
Content-Type: text/plain; charset="us-ascii"

Hi Developers and Maintainers,

We are cleaning up our Bioconductor organization on Github to make sure the organization stays secure, and access is limited to members to repositories as needed.

If anyone is removed from a repository, or lost access to something, please reply back to this thread.

Best regards,

Nitesh

This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
--
Keegan Korthauer, PhD
Postdoctoral Research Fellow
Department of Biostatistics & Computational Biology, Dana-Farber Cancer Institute
Department of Biostatistics, Harvard T. H. Chan School of Public Health
kkorthauer.org



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