[Bioc-devel] Runnable examples
Hi,
If you are using roxygen, you can include a \donttest{} block. But this will still produce the error if it?s less than 80%.
Once you submit your package for review, your reviewer can give you a better idea of how to resolve this issue. But most likely it needs some sort of example.
Take a look at the iSEE package which is also a shiny app (https://github.com/iSEE/iSEE/blob/master/R/iSEE-main.R <https://github.com/iSEE/iSEE/blob/master/R/iSEE-main.R>) for some ideas.
But maybe you can do something like,
#? @examples
if (interactive()) {
runApp(app)
}
Best,
Nitesh
On Aug 6, 2020, at 8:06 AM, Octavio Morante Palacios <octaviompa at gmail.com> wrote: Hi all, I have recently developed a shinyApp useful for DNA methylation analysis. I would like to upload it to Bioconductor. I have executed BiocCheck and I have an error that I don't know how to resolve. "At least 80% of man pages documenting exported objects must have runnable examples." My package only exports one function, that execute the ShinyApp. I don't know how to include runnable examples to that kind of function. Best regards, Octavio [[alternative HTML version deleted]]
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