Message-ID: <6phk5xay2sj.fsf@gopher4.fhcrc.org>
Date: 2007-03-21T16:33:32Z
From: Martin Morgan
Subject: [Bioc-devel] RFC: eSet with two color data
In-Reply-To: <Pine.GSO.4.58.0703211048460.20510@capecod.bwh.harvard.edu> (Vincent Carey's message of "Wed, 21 Mar 2007 10:49:23 -0400 (EDT)")
Vincent Carey 525-2265 <stvjc at channing.harvard.edu> writes:
>>
>> Also (different topic:) do we already have an ontology in place
>> somewhere for control features (e.g. empty features, features measuring
>> a known spike-in ratio)?
>
> not to my knowledge. does MAGE-OM address this?
There's a relevant MGED ontology / controlled vocabulary for use with
MAGE, specifically in the DesignElement package ControlType
association. There's a useful summary in the table here:
http://www.ebi.ac.uk/~ele/ext/submitter.html#ontol
pointing to
http://mged.sourceforge.net/ontologies/MGEDontology.php#ControlType
Martin
--
Martin Morgan
Bioconductor / Computational Biology
http://bioconductor.org