Message-ID: <m2zmhs1udd.fsf@ziti.local>
Date: 2006-05-08T14:09:02Z
From: Seth Falcon
Subject: [Bioc-devel] annotation package for Affymetrix Hum6000 array
In-Reply-To: <60655.218.212.96.120.1146756411.squirrel@www.altern.org> (lgautier@altern.org's message of "Thu, 4 May 2006 17:26:51 +0200 (CEST)")
lgautier at altern.org writes:
>> lgautier at altern.org writes:
>>> Since we are about Affymetrix chips and data, apparently there is a
>>> quirk
>>> with the example data in 'affydata' and the corresponding probe sequence
>>> package (the probe sets in the AffyBatch does not seem to match the
>>> probe
>>> sequences).
>>>
>>> I am not sure this is a big deal, but it might be handy to know for the
>>> people having code dealing with Affymetrix probe sequence and having
>>> examples for it
>>> (for example, it makes some of example in 'affypdnn' examples behave
>>> erratically).
>>
>> Can you give a bit more detail or an example?
>
> Sorry for the delay. I get a zillion things to do those days.
I understand how that goes :-)
Thanks for the details. We'll look into it.
+ seth