Message-ID: <IA0PR14MB64167CF9A94B415517991F69DAF1A@IA0PR14MB6416.namprd14.prod.outlook.com>
Date: 2025-10-24T20:45:01Z
From: Andres Wokaty
Subject: [Bioc-devel] kjohnson3 alternates between OK and 'Error' for build check
In-Reply-To: <CABj3AxgESfNWjPoDSqaLJoYjC+jGT_2g8Jc_znFVquUCqYD20Q@mail.gmail.com>
Hi Rodolphe,
I'm not sure why there is some fluxuation. I see that it is currently passing on kjohnson3. I've tagged taishan's maintainer on the #arm-linux channel of our Zulip, which you are welcome to follow at https://community-bioc.zulipchat.com/#narrow/channel/507633-arm-linux/topic//with/545824051.
Andres Wokaty (they/them)
Waldron Lab at CUNY SPH
Bioconductor Core Team
________________________________
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Rodolphe Loubaton <loubaton.rodolphe at gmail.com>
Sent: Sunday, October 19, 2025 11:29 AM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] kjohnson3 alternates between OK and 'Error' for build check
* This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. *
Hi,
I am the maintainer of the R package MultiRNAflow.
I recently pushed an update of my package.
My package passed the install and build check realized by the computers
- *nebbiolo2* [Linux (Ubuntu 24.04.3 LTS) / x86_64]
- *lconway* [macOS 12.7.6 Monterey / x86_64]
My package pass the install check for *kjohnson3* [macOS 13.7.7 Ventura /
arm64] and *taishan* [Linux (openEuler 24.03 LTS) / aarch64] but the build
check alternates between 'OK' and 'ERROR' for the last 7-8 days for
*kjohnson3*.
The error message is
*Running 'texi2dvi' on 'MultiRNAflow_vignette-knitr.tex'
failed.Messages:/opt/R/arm64/bin/texi2dvi: biber failed*
It seems *kjohnson3* and *taishan *struggle with bibliography when pdf is
created.
Why my package pass successfully *nebbiolo2* and *lconway* check but
alternates between 'OK' and 'ERROR' for *kjohnson3* ?
Sincerely yours,
Rodolphe Loubaton
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