[Bioc-devel] vignette problems
When I try and install the version on the master branch of the Bioconductor git repository I get STAN master$ Rdev --vanilla CMD INSTALL . * installing to library ?/home/mtmorgan/R/x86_64-pc-linux-gnu-library ... ** testing if installed package can be loaded Error: package or namespace load failed for 'STAN' in namespaceExport(ns, exports): undefined exports: viterbi2Gviz This comes about in a rather interesting way because the body of plotViterbi is not defined plotViterbi <- function(viterbi, regions, gen, chrom, from, to, statecols, col) #' ... Can you please commit a version of the package that installs? Martin
On 03/27/2018 06:42 PM, campos wrote:
Dear bioc-devel team,
I am developing the STAN packages and I am running into problems when
trying to build my package. The problem is the following:
Error in vignette_type(Outfile) :
? Vignette product 'STAN.tex' does not have a known filename extension
('NA')
ERROR: installing vignettes failed
* removing '/tmp/Rtmp925Iru/Rinst63471ff1efdc/STAN'
I tried to build the package in old versions (which they used to work)
and I run in other problems but in this case is:
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,? :
? Running 'texi2dvi' on 'STAN.tex' failed.
LaTeX errors:
! LaTeX Error: File `beramono.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
Could you help me with this problem?
Thank you very much,
Rafael
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