[Bioc-devel] Vignette update after change in git mirror repo
Be sure that you bumped the version number to trigger a build. Sean
On Fri, Apr 21, 2017 at 1:18 PM, Maia Smith <mas29 at sfu.ca> wrote:
Hi Sean, Thanks for your response, perhaps I was unclear. I used "Scenario 1: Use Git Locally, No GitHub Repository" in the how-to page, and committed to svn (I think!). The changes are reflected in the bioconductor mirror ( https://github.com/Bioconductor-mirror/timescape) but not in the vignette (https://bioconductor.org/packages/devel/bioc/vignettes/ timescape/inst/doc/timescape_vignette.html). Perhaps I made an error somewhere? Best, Maia On Thu, Apr 20, 2017 at 1:24 PM, Sean Davis <seandavi at gmail.com> wrote:
Hi, Maia. The git mirror is not used for building packages. Instead, you will need to commit to svn for changes to show up on Bioconductor. See here for details of working with git and svn together. https://www.bioconductor.org/developers/how-to/git-mirrors/ If I misunderstood what you are saying, could you clarify a bit? Sean On Thu, Apr 20, 2017 at 3:35 PM Maia Smith <mas29 at sfu.ca> wrote:
How long does it take for the html vignette to update after a change in
the
git mirror has taken place? I changed my code in the git mirror a few
days
ago, and the html vignette hasn't incorporated these changes yet.
Thanks in advance for your help.
Maia
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Sean Davis, MD, PhD Center for Cancer Research National Cancer Institute National Institutes of Health Bethesda, MD 20892 https://seandavi.github.io/ https://twitter.com/seandavis12 [[alternative HTML version deleted]]