Message-ID: <2E898558-CE17-4127-A60F-FCCDE2A061E6@mail.utoronto.ca>
Date: 2021-02-16T23:00:12Z
From: Catherine Ross
Subject: [Bioc-devel] R-CMD-check fails on ubuntu-20.04 (release)
Hello,
I?m running the following Github R-CMD-check workflow file on my package repository.
https://github.com/r-lib/actions/tree/master/examples#standard-ci-workflow
It passes on 3/4 operating systems ? windows-latest (release), macOS-latest (release), ubuntu-20.04 (devel) ? but fails on ubuntu-20.04 (release).
It fails at the ?Install dependencies? section with the following error message:
* installing *source* package ?RCy3? ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/runner/work/_temp/Library/igraph/libs/igraph.so': libglpk.so.40: cannot open shared object file: No such file or directory Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load Execution halted ERROR: lazy loading failed for package ?RCy3? * removing ?/home/runner/work/_temp/Library/RCy3?
I run into no issues when running devtools::check() locally on my system (macOS Big Sur 11.2).
Any ideas on how to fix this issue?
Thanks,
Catherine
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