[Bioc-devel] missing font causes build warning on bioc release packages
Hi, ----- Original Message -----
From: "Ludwig Geistlinger" <Ludwig.Geistlinger at bio.ifi.lmu.de> To: bioc-devel at r-project.org Sent: Wednesday, May 27, 2015 6:54:33 AM Subject: [Bioc-devel] missing font causes build warning on bioc release packages Dear Bioc Team, As far as I am aware this applies to the web pages of all released bioc packages http://www.bioconductor.org/packages/release/bioc/html/<package>.html The new tags on the head of the page issue a build warning that is caused during check on moscato2: The warning reads: * checking PDF version of manual ...Warning: running command '"E:/biocbld/bbs-3.1-bioc/R/bin/x64/Rcmd.exe" Rd2pdf --batch --no-preview --build-dir="E:/biocbld/bbs-3.1-bioc/tmpdir/RtmpITv7Be/Rd2pdf18341e1a398" --no-clean -o <package-vignette>.pdf "E:/biocbld/bbs-3.1-bioc/meat/edgeR.buildbin-libdir/<package>"' had status 1 WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: !pdfTeX error: pdflatex.EXE (file ts1-zi4r): Font ts1-zi4r at 540 not found ==> Fatal error occurred, no output PDF file produced! Thanks for fixing!
This has been fixed in today's builds. For example: http://bioconductor.org/checkResults/release/bioc-LATEST/EnrichmentBrowser/moscato2-buildsrc.html PS., in future please include specific package names so we can track down the issues (in this case they did _not_ occur in all packages). Thanks, Dan
Best, Ludwig -- Dipl.-Bioinf. Ludwig Geistlinger Lehr- und Forschungseinheit f?r Bioinformatik Institut f?r Informatik Ludwig-Maximilians-Universit?t M?nchen Amalienstrasse 17, 2. Stock, B?ro A201 80333 M?nchen Tel.: 089-2180-4067 eMail: Ludwig.Geistlinger at bio.ifi.lmu.de
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