Message-ID: <62c83a30-19ed-37b7-1168-2d8ff3496435@fgcz.ethz.ch>
Date: 2021-11-22T08:51:00Z
From: Witold E Wolski
Subject: [Bioc-devel] ERROR: More than one VignetteEngine specified.
In-Reply-To: <CAN+W6_u1kKtz2VeVVGVsr35APc_LQBqdEhFwJV0tPsKj6=UE1Q@mail.gmail.com>
Dear Lluis,
Thank you for looking into it. I deleted `it,` and it and the error went
away.
Best,
Witek
On 19/11/2021 16:36, Llu?s Revilla wrote:
> Hi Witek,
>
> Probably it is a false positive, caused by a commented VignetteEngine on
> https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16
> <https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16>
>
> If you delete it (and the line below to be sure) I guess it will go away.
>
> Best,
>
> Llu?s
>
> On Fri, 19 Nov 2021 at 14:33, Witold Wolski <wew at fgcz.ethz.ch
> <mailto:wew at fgcz.ethz.ch>> wrote:
>
> Hi,
>
> I am getting the following error when running BiocCheck
> "ERROR: More than one VignetteEngine specified."
>
> But all the vignettes have the same
> %\VignetteEngine{knitr::rmarkdown}
>
> specified.
> Where else does BiocCheck look for vignetteEngine specification?
>
>
>
> Regards
> Witek
>
> PS. the code can be found here.
> https://github.com/protViz/prozor <https://github.com/protViz/prozor>
>
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