Message-ID: <m2mzrtilam.fsf@macaroni.local>
Date: 2005-04-20T16:18:31Z
From: Seth Falcon
Subject: [Bioc-devel] warnings from R CMD check on Win32 about object files in src/
In-Reply-To: <mailman.54.1113987493.1587.bioc-devel@stat.math.ethz.ch> (bioc-devel-bounces@stat.math.ethz.ch's message of "Wed, 20 Apr 2005 10:58:13 +0200")
Hi all,
Eryk wrote with the following question:
> Not shure how to takle the the following warning:
>
> * checking if this is a source package ... WARNING
> Subdirectory 'msbase/src' contains object files.
>
> (,on http://www.bioconductor.org/checkResults/Windows/msbase)
>
> I have controlled if I have incidentally checked in some object files. All
> seems to be OK. The unix check runs "OK".
>
> Any suggestions?
We were looking into the same issue yesterday and didn't yet come up
with a solution.
I'm nearly certain this is not a fault with the package itself, but
either something we are doing wrong in our build/check process or a
small bug in the R CMD check stuff.
What I was seeing yesterday (testing on Linux) was that running R CMD
check --no-vignettes would show a WARNING if a previous R CMD INSTALL
had left object files. Running with vignettes causes a compilation
cycle and subsequent src/ dir cleaning.
+ seth