[Bioc-devel] svn commit fails
Hi Jelle, We've added a pre-commit hook to our svn repo a few weeks ago which purpose was to prevent developers from committing files that differ only in case. See the announcement here: https://stat.ethz.ch/pipermail/bioc-devel/2009-January/001770.html It seems that this new setup is also enforcing comments for commits. That was not intended. In fact I was not aware of this new behaviour until I saw your post. Just FYI the pre-commit script we are using is check-case-insensitive.pl from: http://svn.collab.net/repos/svn/branches/1.4.x/contrib/hook-scripts/ When we installed this script on our svn server, we also inadvertendly activated some code that make sure that the log message contains some text. Since this is indeed considered good practice, let's keep it for now (unless there is some strong disagreement about it). I added an informative error message so now you will get: Transmitting file data .svn: Commit failed (details follow): svn: MERGE request failed on '/bioconductor/trunk/madman/Rpacks/Biostrings' svn: 'pre-commit' hook failed with error output: Please comment your commit. Thanks! The Biocore Team Cheers, H.
J.J.Goeman at lumc.nl wrote:
Dear developers, Holger Schwender suggested to add a comment to the svn. This seems to be the solution. Are comments obligatory for commits? Kind regards, Jelle
-----Original Message----- From: bioc-devel-bounces at stat.math.ethz.ch [mailto:bioc-devel-bounces at stat.math.ethz.ch] On Behalf Of J.J.Goeman at lumc.nl Sent: 26 January 2009 12:20 To: bioc-devel at stat.math.ethz.ch Subject: [Bioc-devel] svn commit fails Dear all, When I try to commit my package to https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gl obaltest, it fails with the following not-so-informative error message. I have no clue where to look for a source of this problem. Does anybody have a suggestion? Modified: M:\R\packages\globaltest\DESCRIPTION Modified: M:\R\packages\globaltest\R\globaltest.R Modified: M:\R\packages\globaltest\R\internal.R Modified: M:\R\packages\globaltest\changelog.txt Sending content: M:\R\packages\globaltest\R\globaltest.R Sending content: M:\R\packages\globaltest\DESCRIPTION Sending content: M:\R\packages\globaltest\changelog.txt Sending content: M:\R\packages\globaltest\R\internal.R Error: Commit failed (details follow): Error: 'pre-commit' hook failed with error output: Finished!: svn update seems to work without problems. I'm using win XP with TortoiseSVN 1.5.6, Build 14908 - 32 Bit , 2008/12/20 11:51:04 Subversion 1.5.5, apr 1.2.12 apr-utils 1.2.12 berkeley db 4.4.20 neon 0.28.3 OpenSSL 0.9.8i 15 Sep 2008 zlib 1.2.3 Best regards, Jelle www.msbi.nl/goeman
_______________________________________________ Bioc-devel at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
_______________________________________________ Bioc-devel at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fhcrc.org Phone: (206) 667-5791 Fax: (206) 667-1319