Skip to content
Prev 14108 / 21312 Next

[Bioc-devel] Rstudio returns fail for package check

Hi Felix,

Thank you very much for mentioning that.
As you have guessed, I?m on windows.
Installing the version 6.0.1 should fix the issue.
Thanks again.

Sincerely,
Arman

From: Felix Ernst<mailto:felix.ernst at ulb.ac.be>
Sent: Monday, October 1, 2018 12:41
To: 'Arman Shahrisa'<mailto:shahrisa.arman at hotmail.com>
Subject: RE: [Bioc-devel] Rstudio returns fail for package check

Hi Arman,

I suppose you are using a Windows system?

If yes, rollback to roxygen2 version 6.0.1 using the install_version
function of devtools.

Version 6.1.0 apparently has a bug on windows:
https://github.com/klutometis/roxygen/issues/766

It is fixed on the github branch, but has not hit CRAN yet as fas as I know.

Kind regards,
Felix

---
Felix Ernst, PhD
Universit? Libre de Bruxelles
RNA MOLECULAR BIOLOGY
BIOPARK Charleroi Brussels-South CAMPUS
Rue Profs Jeener & Brachet, 12
B-6041 Charleroi - Gosselies
BELGIUM
+32(2)650 9774 (office phone)
felix.ernst at ulb.ac.be



-----Original Message-----
From: Bioc-devel <bioc-devel-bounces at r-project.org> On Behalf Of Arman
Shahrisa
Sent: Sonntag, 30. September 2018 21:33
To: bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] Rstudio returns fail for package check



Hi every one,

I have a problem with my package check in Rstudio.
I have no idea what might be causing the problem.
I would be grateful if someone could help.



==> devtools::check()



Updating cbaf documentation

Loading cbaf

Error in file(con, "r") : cannot open the connection

Calls: <Anonymous> ... parse_package -> lapply -> FUN -> read_lines ->
<Anonymous> -> file

In addition: Warning message:

In file(con, "r") :

  cannot open file 'Z:\cbaf\Source\cbaf\R': Permission denied

Execution halted



Exited with status 1.


Best regards,
Arman



_______________________________________________
Bioc-devel at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
Message-ID: <HE1PR05MB15312EBDC180AF8465A336648BEF0@HE1PR05MB1531.eurprd05.prod.outlook.com>
In-Reply-To: <001e01d45966$b4a70d10$1df52730$@ulb.ac.be>