[Bioc-devel] bioctitle issue for Rmd
Hi all,? Also experiencing this.? http://bioconductor.org/checkResults/release/bioc-LATEST/FELLA/tokay1-buildsrc.html Hope it gets fixed soon, S
On Wednesday, December 18, 2019 11:30 CET, "Pages, Herve" <hpages at fredhutch.org> wrote:
?Hi Vince, I opened an issue on GitHub for this: https://github.com/Bioconductor/BiocStyle/issues/68 H.
On 12/15/19 14:31, Vincent Carey wrote:
On my mac and linux systems I am seeing a new
error. With the latest checkout of BiocStyle
rmarkdown::render("foo/BiocStyle/vignettes/AuthoringRmdVignettes.Rmd",
BiocStyle::pdf_document())
produced
! Undefined control sequence.
l.56 \bioctitle
[]{Authoring R Markdown vignettes}
Error: Failed to compile AuthoringRmdVignettes.tex. See
https://urldefense.proofpoint.com/v2/url?u=https-3A__yihui.org_tinytex_r_-23debugging&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=QQEy7hX7LwNRfF2vOZqRi_8FzxYRlsfwkrE-ikutFo8&s=DK8vF4FSB0aOHaOmdcHCs_2qILx4O70kCr3gdn2oWyg&e= for debugging tips. See
AuthoringRmdVignettes.log for more info.
sessionInfo()
R Under development (unstable) (2019-12-06 r77536) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Debian GNU/Linux 10 (buster) Matrix products: default BLAS/LAPACK: /usr/lib/x86_64-linux-gnu/libopenblasp-r0.3.5.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=C [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] BiocStyle_2.15.2 rmarkdown_2.0 BiocManager_1.30.10 loaded via a namespace (and not attached): [1] Rcpp_1.0.3 bookdown_0.16 digest_0.6.23 magrittr_1.5 [5] evaluate_0.14 rlang_0.4.2 stringi_1.4.3 tools_4.0.0 [9] stringr_1.4.0 tinytex_0.18 xfun_0.11 yaml_2.2.0 [13] compiler_4.0.0 htmltools_0.4.0 knitr_1.26
-- Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ?