[Bioc-devel] Cairo error in Windows server
Thanks for these updates. I get the same build error with my package, dittoSeq, so this can probably be "confirmed" as a 'Cairo installation issue that should clear up in tomorrow?s build reports' and not as an animalcules-specific issue. Best, Dan _______________________________ Daniel Bunis PhD Candidate, Burt & Sirota Labs Biomedical Sciences Program University of California, San Francisco He/Him/His daniel.bunis at ucsf.edu<mailto:daniel.bunis at ucsf.edu> 856-905-0499
On Apr 14, 2020, at 12:10 PM, Shepherd, Lori <Lori.Shepherd at RoswellPark.org<mailto:Lori.Shepherd at RoswellPark.org>> wrote:
I just reinstalled Cairo again to both architectures. Cairo is known to be a particular challenging package for our builders. It looks like a new version appeared on CRAN this past weekend. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Yue Zhao (Jason) <yuezh at bu.edu<mailto:yuezh at bu.edu>>
Sent: Monday, April 13, 2020 5:14 PM
To: Shepherd, Lori <Lori.Shepherd at RoswellPark.org<mailto:Lori.Shepherd at RoswellPark.org>>
Cc: bioc-devel <bioc-devel at r-project.org<mailto:bioc-devel at r-project.org>>
Subject: Re: [Bioc-devel] Cairo error in Windows server
Sent: Monday, April 13, 2020 5:14 PM
To: Shepherd, Lori <Lori.Shepherd at RoswellPark.org<mailto:Lori.Shepherd at RoswellPark.org>>
Cc: bioc-devel <bioc-devel at r-project.org<mailto:bioc-devel at r-project.org>>
Subject: Re: [Bioc-devel] Cairo error in Windows server
Hi Lori, Thanks for the previous update, but the same error shows up again today, would you please check the Cairo in the Windows server? Thank you! PS. the error message: https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_release_bioc-2DLATEST_animalcules_tokay1-2Dchecksrc.html&d=DwICAg&c=iORugZls2LlYyCAZRB3XLg&r=basuzE7-VlMupNUhjOlOjq3Z71OZ7WVlqjvCai9jtug&m=RxM38Ya7V3JXYe8RL_frUAtwMB3VxNvWT0XwWo3r1QY&s=yO7r-OhxEb5J3NpMF_FR94z00WX5uqyv-3rRlTd0e30&e= Best, Jason -- Yue (Jason) Zhao PhD Candidate, Bioinformatics Program Boston University yuezh at bu.edu<mailto:yuezh at bu.edu><mailto:yuezh at bu.edu> On Mon, Mar 16, 2020 at 12:37 PM Shepherd, Lori <Lori.Shepherd at roswellpark.org<mailto:Lori.Shepherd at roswellpark.org><mailto:Lori.Shepherd at roswellpark.org>> wrote: I have just reinstalled Cairo on our builders and tested the install on both the 64-bit and 32-bit mode. Hopefully this should clear up in tomorrows build report. Please let us know if this continues to be an issue. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-bounces at r-project.org<mailto:bioc-devel-bounces at r-project.org><mailto:bioc-devel-bounces at r-project.org>> on behalf of Yue Zhao (Jason) <yuezh at bu.edu<mailto:yuezh at bu.edu><mailto:yuezh at bu.edu>> Sent: Monday, March 16, 2020 10:38 AM To: bioc-devel <bioc-devel at r-project.org<mailto:bioc-devel at r-project.org><mailto:bioc-devel at r-project.org>> Subject: [Bioc-devel] Cairo error in Windows server Hello Bioc Community, The CHECK in the windows server throws an error message that is not seen in other platforms and local windows computer: Error: .onLoad failed in loadNamespace() for 'Cairo', details: call: library.dynam("Cairo", pkgname, libname) error: DLL 'Cairo' not found: maybe not installed for this architecture? The link to the report: https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_release_bioc-2DLATEST_animalcules_tokay1-2Dchecksrc.html&d=DwICAg&c=iORugZls2LlYyCAZRB3XLg&r=basuzE7-VlMupNUhjOlOjq3Z71OZ7WVlqjvCai9jtug&m=RxM38Ya7V3JXYe8RL_frUAtwMB3VxNvWT0XwWo3r1QY&s=yO7r-OhxEb5J3NpMF_FR94z00WX5uqyv-3rRlTd0e30&e= We have tired to find solutions, but it seems like a problem with the windows server at Bioc? Please let me know if you have some advice, I really appreciate it. Thanks! Best, Jason *--* *Yue (Jason) Zhao* PhD Candidate, Bioinformatics Program Boston University yuezh at bu.edu<mailto:yuezh at bu.edu><mailto:yuezh at bu.edu> [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org<mailto:Bioc-devel at r-project.org><mailto:Bioc-devel at r-project.org> mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=iORugZls2LlYyCAZRB3XLg&r=basuzE7-VlMupNUhjOlOjq3Z71OZ7WVlqjvCai9jtug&m=RxM38Ya7V3JXYe8RL_frUAtwMB3VxNvWT0XwWo3r1QY&s=VzgHbdfxzpav42pyeFxXF9gar3WLJjSjAWIb6gToITo&e= This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org<mailto:Bioc-devel at r-project.org> mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=iORugZls2LlYyCAZRB3XLg&r=basuzE7-VlMupNUhjOlOjq3Z71OZ7WVlqjvCai9jtug&m=RxM38Ya7V3JXYe8RL_frUAtwMB3VxNvWT0XwWo3r1QY&s=VzgHbdfxzpav42pyeFxXF9gar3WLJjSjAWIb6gToITo&e=