[Bioc-devel] One to more id mapping for annotation package building
Hi, Marc Got it! Thanks a lot. Gilbert
On 5/19/10 3:39 PM, "Marc Carlson" <mcarlson at fhcrc.org> wrote:
Hi Gilbert, It sounds like you want to see the manual page for the toggleProbes() function. By default, multple mapping probes are not exposed. But they ARE in the db and you CAN expose then by using toggleProbes(). Marc On 05/19/2010 01:07 PM, Gilbert Feng wrote:
Hi, Bioc-dev people I noticed, if one ID, like a lumi nuID, maps two or more refseq ids, which point to different entrez genes, and this information was built in an annotation package by 'makeDBPackage', it will return NA when I use 'lookUp' to retrieve info for that nuID. But if those refseq IDs point to the same entrez id, the correct result is returned. I wonder whether I forget something or current AnnotationDBI does not support this type of one-to-more id mapping. Thanks a lot! Gilbert
_______________________________________________ Bioc-devel at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
_______________________________________________ Bioc-devel at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel