Yes I can extend to January 12.? If you have any troubles please feel
free to ask on the bioc-devel at r-project.org Mailing list.
There are useful git help guides for updating your package
http://bioconductor.org/developers/how-to/git/
Get Outlook for Android <https://aka.ms/ghei36>
------------------------------------------------------------------------
*From:* Paola Rancoita <rancoita.paola at gmail.com>
*Sent:* Friday, December 13, 2019 9:37:29 PM
*To:* Shepherd, Lori <Lori.Shepherd at RoswellPark.org>
*Cc:* marcus.hutter at anu.edu.au <marcus.hutter at anu.edu.au>
*Subject:* Re: Bioconductor mBPCR
Dear Prof. Sheperd,
I am sorry not having answering you before. Somehow the previous
emails were filtered by my mail account and I did not realized it.
I surely want to maintain my package, but I need some time to
understand how I can fix the issues. I will try to do it as soon as
possible but this is a very busy period for me.
Moreover, I need to understand how the new procedure for updating the
code works since last time I used SVN.? Can you extend my deadline to
January 12th?
Thank you in advanced.
Best regards,
Paola
Il 13/12/2019 15:35, Shepherd, Lori ha scritto:
This is your second warning. ?If the package is not fixed by the end
of the month we will begin the deprecation process for your package.
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
------------------------------------------------------------------------
*From:* Shepherd, Lori
*Sent:* Monday, November 18, 2019 11:03 AM
*To:* rancoita.paola at gmail.com <mailto:rancoita.paola at gmail.com>
<rancoita.paola at gmail.com> <mailto:rancoita.paola at gmail.com>;
marcus.hutter at anu.edu.au <mailto:marcus.hutter at anu.edu.au>
<marcus.hutter at anu.edu.au> <mailto:marcus.hutter at anu.edu.au>
*Subject:* Bioconductor mBPCR
Please be advised your package is failing on all three platforms in
devel 3.11
http://bioconductor.org/checkResults/devel/bioc-LATEST/mBPCR
The package SNPchip has been user requested deprecated in
Bioconductor 3.10. ?You will have to alter your package to not
utilize SNPchip to avoid your own package being deprecated. ?We made
you aware of this deprecation back in May and the SNPchip packages
has had a deprecation since then as well.
The other alternative is to take over maintainership of SNPchip
package but you will need to reach out to the maintainer of the
package to formalize this request.
Cheers,
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
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