[Bioc-devel] normalize() is now defined in BiocGenerics
Hi,
The definition is:
setGeneric("normalize",
function(object, ...) standardGeneric("normalize")
)
There seemed to be a pre-existing consensus that the name of the first
arg of this function should be 'object' so I kept it.
This is in BiocGenerics 0.7.1.
We strongly recommend that packages that define their own normalize()
(as a generic or an ordinary function) be modified to "use" this new
generic instead, that is, that they import it and define methods for
it. Those packages are: affy, codelink, deepSNV, diffGeneAnalysis,
EBImage, flowCore, isobar, MSnbase, oligo, and xps.
Please let us know if you have questions or concerns about this.
Thanks,
H.
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fhcrc.org Phone: (206) 667-5791 Fax: (206) 667-1319