[Bioc-devel] Build problem with malbec2
Hi Roel, It looks like Michael fixed rtracklayer yesterday and that MutationalPatterns 1.2.1 could finally propagate: http://bioconductor.org/checkResults/release/bioc-LATEST/MutationalPatterns/malbec2-buildsrc.html The landing page should get updated soon: http://bioconductor.org/packages/MutationalPatterns Cheers, H.
On 05/19/2017 06:34 AM, Janssen-10, R.R.E. wrote:
Dear Valerie, Could we maybe do a manual build for the package, so that the bugfixed version can be propagated to users? Kind regards, Roel Janssen
________________________________________ From: Bioc-devel [bioc-devel-bounces at r-project.org] on behalf of Janssen-10, R.R.E. [R.R.E.Janssen-10 at umcutrecht.nl] Sent: Monday, May 15, 2017 3:06 PM To: Michael Lawrence; bioc-devel at r-project.org Subject: Re: [Bioc-devel] Build problem with malbec2 Dear Michael, Do you have any indication on when we can expect the fix? This is currently keeping Linux users from getting our latest bugfixed version. Kind regards, Roel Janssen ________________________________________ From: Bioc-devel [bioc-devel-bounces at r-project.org] on behalf of Janssen-10, R.R.E. [R.R.E.Janssen-10 at umcutrecht.nl] Sent: Wednesday, May 10, 2017 3:33 PM To: Obenchain, Valerie; bioc-devel at r-project.org Cc: Michael Lawrence Subject: Re: [Bioc-devel] Build problem with malbec2 Dear Valerie, Ok. And thanks Michael, for working on a fix. Kind regards, Roel Janssen From: Obenchain, Valerie [Valerie.Obenchain at RoswellPark.org] Hi Roel, Looks like the problem is in rtracklayer (also red on the release build report). I think Michael is aware of this and a fix will be coming soon. Valerie On 05/10/2017 02:23 AM, Janssen-10, R.R.E. wrote: Dear Bioconductorians, Is there something wrong with malbec2, or is there something broken in our package? See the build report: https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_release_bioc-2DLATEST_MutationalPatterns_malbec2-2Dbuildsrc.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=MyZsFQqdxhaBUOBrVJIhg41VpaZSbAcH1igpYP6eqtk&s=aZyiKKAhTq_cai7kxgmnhwn_NsQVyH5Zj4r-lFsMngA&e= Kind regards, Roel Janssen ------------------------------------------------------------------------------ De informatie opgenomen in dit bericht kan vertrouwelijk zijn en is uitsluitend bestemd voor de geadresseerde. Indien u dit bericht onterecht ontvangt, wordt u verzocht de inhoud niet te gebruiken en de afzender direct te informeren door het bericht te retourneren. Het Universitair Medisch Centrum Utrecht is een publiekrechtelijke rechtspersoon in de zin van de W.H.W. (Wet Hoger Onderwijs en Wetenschappelijk Onderzoek) en staat geregistreerd bij de Kamer van Koophandel voor Midden-Nederland onder nr. 30244197. Denk s.v.p aan het milieu voor u deze e-mail afdrukt. ------------------------------------------------------------------------------ This message may contain confidential information and is...{{dropped:6}} _______________________________________________ Bioc-devel at r-project.org mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=MyZsFQqdxhaBUOBrVJIhg41VpaZSbAcH1igpYP6eqtk&s=f9IAqbtHYuIzQC6mMwh4kAZAYSgDDNUZMxSMSyzDtQs&e=
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