[Bioc-devel] Bioconductor 3.5 release: potential deprecations
Hi Roel, Thank you for working on the package. The builds start at 5pm EST daily. If it's helpful, you can see which R version, compilers and compiler flags are used for each build machine by clicking the name at the top left of the report: http://www.bioconductor.org/checkResults/devel/bioc-LATEST/ Valerie
On 04/20/2017 12:38 AM, Janssen-10, R.R.E. wrote:
Dear Valerie, We're working on MutationalPatterns as you can see (we've had our last changes pushed into the SVN repository just two days ago). Due to the timezone differences between Europe and the US, we seem to be missing out the starting point of a new build round. So, at which time do you start a new build round? We have the fixes in place to address the build issues. There seems to be a difference between the R setup on your build machines and ours, which leads to differences in the tests. They all pass on our machines, so it's hard for us to debug this in a timely manner. Thanks! Kind regards, Roel Janssen
________________________________________ From: Bioc-devel [bioc-devel-bounces at r-project.org] on behalf of Obenchain, Valerie [Valerie.Obenchain at RoswellPark.org] Sent: Wednesday, April 19, 2017 9:19 PM To: bioc-devel at r-project.org Subject: [Bioc-devel] Bioconductor 3.5 release: potential deprecations Hi, Due to errors / unresponsive maintainers this new group of packages has been identified for potential deprecation in Biocondcutor 3.5. anamiR FunChiP MutationalPatterns seqplots snm ssviz stepwiseCM ToPASeq If anyone is interested in taking over as maintainer please let us know. If not fixed by Friday, April 21, these will be deprecated in 3.5. Valerie This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. _______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ------------------------------------------------------------------------------ De informatie opgenomen in dit bericht kan vertrouwelijk zijn en is uitsluitend bestemd voor de geadresseerde. Indien u dit bericht onterecht ontvangt, wordt u verzocht de inhoud niet te gebruiken en de afzender direct te informeren door het bericht te retourneren. Het Universitair Medisch Centrum Utrecht is een publiekrechtelijke rechtspersoon in de zin van de W.H.W. (Wet Hoger Onderwijs en Wetenschappelijk Onderzoek) en staat geregistreerd bij de Kamer van Koophandel voor Midden-Nederland onder nr. 30244197. Denk s.v.p aan het milieu voor u deze e-mail afdrukt. ------------------------------------------------------------------------------ This message may contain confidential information and ...{{dropped:23}}