[Bioc-devel] MAEndToEnd workflow dropped from the build system?
*ahem*, yes I actually did not run R CMD check before pushing, sorry! thanks a lot for your prompt response Lori! Best wishes, Bernd?
On Do, 2018-08-23 at 11:08 +0000, Shepherd, Lori wrote:
I think this may be do to a malformed DESCRIPTION file that was committed in either 1.99.2 or 1.99.3.? When I tried to build the package I got Workflows$ R CMD build maEndToEnd/ * checking for file 'maEndToEnd/DESCRIPTION' ...Error : file '/home/lori/b/Workflows/maEndToEnd/DESCRIPTION' is not in valid DCF format ?EXISTS but not correct format I think this is because there were newline breaks in the description field of the DESCRIPTION file.? I pushed an updated and hopefully it will propagate on tomorrow's build of the workflows.? I will try and keep an eye on this to make sure it corrected the issue but if you still do not see the package propagating next week please reach back out.? Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Bernd Klaus <bernd.klaus at embl.de> Sent: Thursday, August 23, 2018 4:15:17 AM To: bioc-devel Subject: [Bioc-devel] MAEndToEnd workflow dropped from the build system? ? Dear Bioc-Team, it seem like our MyEndToEnd workflow has somehow? been dropped from the build system, the last build is from Aug 8th: http://bioconductor.org/checkResults/3.8/workflows-LATEST/maEndToEnd/ at version 1.99.1 However, the current version is 1.99.4, the last commit is? 135704a ?by Lori. See here on github: https://github.com/b-klaus/maEndToEnd/commit/135704a1ad01025bef967666 31 f5bbf87d874f99 For some reason this is not propagated to the build system ... Thanks a lot for your help! Bernd
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