[Bioc-devel] EXTERNAL: Re: Difficulty obtaining access to BioC git repository

Wed, Oct 11, 2017 7:54 AM

Hi Nitesh:

Thank you for the message. In my previous email I should have mentioned that I have matched each VM public key with their respective private keys, which are in both of the respective .ssh folders.
It?s puzzling, but it?s something we?ll have to get to the bottom of on our end. I think we?ll start with fresh new key pairs on the VMs; if so, I?ll let you know.

Best regards,

Taylor

On Oct 11, 2017, at 6:48 AM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:

Hi Taylor,

It means that those two VM?s do not have the appropriate private keys which correspond to these public keys. 

Eg: If your public key is called ?id_rsa.pub? (.pub is for public key), then, there is another file called ?id_rsa? (no extension is the private key which corresponds to it). Your VM needs to have ?id_rsa? locally, in the ?.ssh? folder.

Best,

Nitesh

On Oct 10, 2017, at 6:16 PM, Raborn, R. Taylor <rtraborn at indiana.edu> wrote:

Hi Nitesh:

Thank you for sending these along.

All of our public keys match the three keys you sent to me, and we were able to sync from my Desktop computer; access from our two VMs failed, suggesting that it?s an issue on that side of things.

Thanks again for your help. I?ll let you know if we have any more questions.

Best regards,

Taylor

On Oct 10, 2017, at 9:54 AM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:

You have the following public key?s in the Bioconductor system, are you sure you are using the correct private keys.


ssh-rsa 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

ssh-rsa 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

ssh-rsa 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

On Oct 9, 2017, at 10:24 PM, Raborn, R. Taylor <rtraborn at indiana.edu> wrote:

Hi Nitesh:

Certainly. I used the following commands:

git clone https://github.com/BrendelGroup/TSRchitect
cd TSRchitect/
git remote add upstream git at git.bioconductor.org:packages/TSRchitect.git
git fetch --all

Fetching origin
Fetching upstream
Permission denied (publickey).
fatal: Could not read from remote repository.

Would you like me to provide my public key as well? I?m sorry for all the trouble.

Best regards,

Taylor

On Oct 9, 2017, at 5:01 PM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:

Please send me the list of commands you tried, and the output.

Your key is in the system. Either you are not using the correct key, or are issuing the wrong command on git. 

Nitesh

On Oct 9, 2017, at 11:45 AM, Raborn, R. Taylor <rtraborn at indiana.edu> wrote:

Hi Nitesh:

Sounds great.

This morning I attempted to sync my GitHub repository with Bioconductor (following the instructions here), but I still wasn?t able to login.

Is there anything further that I need to do to obtain access? I?d be happy to resubmit my information in the google docs form if necessary.

Best regards,

Taylor

On Oct 5, 2017, at 12:17 PM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:

No problem. 

As a heads up for the future, the mailing list might get a quicker response vs the support site as far as GIT goes.

Best,

Nitesh

On Oct 5, 2017, at 12:12 PM, Raborn, R. Taylor <rtraborn at indiana.edu> wrote:

Hi Nitesh;

I see- this makes sense. I apologize for my error and appreciate you providing me with access.

Thank you for your assistance with this.

Best regards,

Taylor

On Oct 5, 2017, at 12:04 PM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:

Hi,

You have submitted multiple times with bad ID?s. This has not gone too well with our application and fails add your key. You first submitted ?rtraborn? with a set of keys, and then with the same set of keys with you valid SVN ID. The system does not add the same key twice with two separate usernames. 

I will manually make changes to give you access. 

Best

On Oct 5, 2017, at 11:49 AM, Raborn, R. Taylor <rtraborn at indiana.edu> wrote:

Hello:

I?m a co-developer and package maintainer for TSRchitect<https://bioconductor.org/packages/release/bioc/html/TSRchitect.html>, a relatively new Bioconductor package.

We wish to push package updates to the Bioconductor git repo, but as of yet I have been unable to do so. This post (link<https://support.bioconductor.org/p/100990/#101170>) on the BioC support page describes the current situation.

Given the previous, is there anything I could be overlooking in my attempts, or is my credential still in the process of being created?

Also, I would like to know if it would be possible to add the co-creater of this package, Dr. Volker Brendel (cc?d on this email), as (another) maintainer of TSRchitect. His GitHub page is here: https://github.com/vpbrendel.

Thank you in advance for your help.

Best regards,

Taylor

--------------------------------
R. Taylor Raborn, PhD
Postdoctoral Fellow, Brendel Group
Computational Genome Science Laboratory
Indiana University, Simon Hall 205B
P:  812.856.9572
rtraborn at indiana.edu<mailto:rtraborn at indiana.edu> | brendelgroup.org<http://brendelgroup.org>




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[Bioc-devel] EXTERNAL: Re: Difficulty obtaining access to BioC git repository

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