[Bioc-devel] wiggleplotr vignette errror: there is no package called 'arrow'
This has to do with the check for dependencies being declared properly. It looks like you are missing arrow in your DESCRIPTION file. If you add it to suggests it should clear up. See: https://stat.ethz.ch/pipermail/bioc-devel/2023-March/019555.html Lori Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Kaur Alasoo <kauralasoo at gmail.com>
Sent: Monday, March 23, 2026 2:55 PM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] wiggleplotr vignette errror: there is no package called 'arrow'
Sent: Monday, March 23, 2026 2:55 PM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] wiggleplotr vignette errror: there is no package called 'arrow'
Hello! I am the maintainer of the wiggleplotr package. Building of the vignette is currently failing in devel on Linux with the following error message: Error: processing vignette 'wiggleplotr.Rmd' failed with diagnostics: there is no package called 'arrow' --- failed re-building ?wiggleplotr.Rmd? SUMMARY: processing the following file failed: ?wiggleplotr.Rmd? Error: Vignette re-building failed. Execution halted https://secure-web.cisco.com/1YhiRWflrNOXI8YrL6BTusw6ouFO_ri_FE3xC7recERzogLw2Z7ddSMmZ-uQFn0e3CQr5SSWtG0G2bJi2VVednbQT2P712wWSY_YieIa3JoXK7DiQ3tBTptG0Mo28WneRyQkDmELsDGDvwHSeGuIeb8DDV_OCa9e5QXQU-BIVQWoBid54wNpXGSEWRJcXw01ksiByTq0y58rGoZjHKd8W3ROMM5kbmc1pLZEQgKUF568bJ1ewlgQwUJSbaDFNoYgffTVdP5xHSH3phAdVv0sQEgrLlpDz5sEC_0MNKjFurP7lj4THI0rccFa3aHrpTu49/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.23%2Fbioc-LATEST%2Fwiggleplotr%2Fnebbiolo1-checksrc.html Interestingly, there is no error on Mac: https://secure-web.cisco.com/1YV6K_jxqsJMFC1_oreEIQicSZmbTEnmfbN-B0A2MXrj7S6LTe12hFFF7Qv9oO3pehdXPgE6FICHhrECz90GwViFMFxmpcpAjZz9turfdkHUL1Bc7RyBCKHmVaDj92DbHlVcHTnvuFVco7sZBCMl7E6Rz4hcdGK7YWx_rsqAEU3d2QwgRG6u6rEBch1idnQGYbczBx0ZSnqwl0UEswyHRuWaQjv0nyUmD4vvk2arCOSIvZWcLNKfazhgOa9LM8HJZ4FVYhZBYW64iKgB8Eb_z_6A3Cw7asoym6ely2Tt3ee_NyBq7x0eEg73NCo-IsyjN/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.23%2Fbioc-LATEST%2Fwiggleplotr%2Fkjohnson3-checksrc.html What would be the best way to resolve this issue? I could remove the parquet input example (which uses arrow) from the vignette, but this would probably not be ideal. Best, Kaur [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org mailing list https://secure-web.cisco.com/1_kCiEmw-9hVeIJelwCPp4BZNI8zJVlTK2wf7a6vSn8DVhDzEkJ2sNJkWXdDFPN4BOcbVSSpwRYub876MfL1tWbRfDkJcaXbutTsP22FLrkMK73-cyIt7AYvLFX7pkrah0fCQBuDn1C0VspoRKPTZCU39V58U0sWbgJe2jexc7UGa_WU-JFPU850AhJ-PI04kN_r9q6eWqumxLuF2SGF4qFFGY0KAKb32Q9Vm6G6JQdRpoQtg2vloKdEUyvYchLtp0X-jW9bWrjISyvNDORYZavfuI1Ekw1HpfLPJOFnKqiWF2__2hozHdC451Z38tCBd/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.