[Bioc-devel] BioC question
On Wed, Feb 6, 2013 at 10:04 AM, Thomas Sandmann
<sandmann.thomas at gene.com> wrote:
Dear BioC developers, I upgraded to R 3.0.0 on my Mac (10.6.8) to make my gCMAP package ready for the next BioC release. Afterward, I reinstalled all the required BioC packages using biocLite. My package depends on "org.Hs.eg.db". Unfortunately, installing the latest "org.Hs.eg.db" via biocLite gives me the following error: Error: package ?org.Hs.eg.db? was built before R 3.0.0: please re-install it I am using R 3.0.0 and biocLite retrieved the org.Hs.eg.db package from http://bioconductor.org/packages/2.12/data/annotation/bin/macosx/leopard/contrib/3.0/org.Hs.eg.db_2.8.0.tgz Perhaps the "org.Hs.eg.db" package has not been rebuilt with R 3.0.0, yet ? Any advice on how to proceed ?
Do this:
biocLite("org.Hs.eg.db", type="source")
Dan
Thanks a lot,
Thomas
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