[Bioc-devel] Build error due to dependencies not available

Fri, Mar 18, 2022 7:57 AM

There was an ERROR installing the png package which had a very bad cascading effect on tokay2.  It should be resolved in today or Monday's report.   At this time, you do not have to do anything and can wait to make sure the ERROR resolves once the dependencies become available.

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Marta Interlandi <marta.interlandi01 at gmail.com>
Sent: Friday, March 18, 2022 10:48 AM
To: bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] Build error due to dependencies not available

Dear all,

I noticed that my package InterCellar is having a build error on tokay2 due
to dependencies not available. I am just wondering if there's anything I am
supposed to do or just wait for these packages to solve their own build
errors.

Thank you for your feedback!!

Best,
Marta

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r InterCellar -R &&
C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build
--keep-empty-dirs --no-resave-data InterCellar
###
##############################################################################
##############################################################################


* checking for file 'InterCellar/DESCRIPTION' ... OK
* preparing 'InterCellar':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies 'ComplexHeatmap', 'biomaRt' are not available for
package 'InterCellar'
* removing 'C:/Users/biocbuild/bbs-3.14-bioc/tmpdir/RtmpqqhMkm/Rinst1ffc20411798/InterCellar'
      -----------------------------------
ERROR: package installation failed

        [[alternative HTML version deleted]]

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[Bioc-devel] Build error due to dependencies not available

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