[Bioc-devel] bioc AMI: permissions in R-libs

Hi Simon,

Yes, this is a known problem. I will fix this for the Bioc 3.3 and 3.4
AMIs and will post back when it's done.

Valerie

Hi

I'm currently working with the Bioconductor Amazon Machine Instance
(AMI) for Bioc 3.3 (ami-64d43409) and wanted to install additional
packages with biocLite(). This failed because about half of the
sub-directories in ~/R-libs are not owned by the standard user 'ubuntu'
but by root. 

Can this be easily fixed in the existing AMI? (I mean, can one just
run a 'chown' and save it as a new AMI?) If so, this might be useful.


Thanks

  Simon


--
| Dr. Simon Anders, Dipl.-Phys.
| Group Leader, Institute for Molecular Medicine Finland (FIMM)
| https://www.fimm.fi/en/research/groups/anders

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