[Bioc-devel] problem with git / svn transition: ssh keys

Tue, Sep 12, 2017 9:20 AM

What name did you store your key under? ?id_rsa? or something else?

Nitesh

On Sep 12, 2017, at 12:11 PM, Luo Weijun <luo_weijun at yahoo.com> wrote:

the following the are commands I used and output:

luo$ git clone git at git.bioconductor.org:packages/pathview
Cloning into 'pathview'...
key_load_public: invalid format
Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.
luo$  ssh -T git at git.bioconductor.org
key_load_public: invalid format
Permission denied (publickey).

Is it because the ssh key is still not in the right format because the suffix " luo_weijun at yahoo.com" was removed as I mentioned in previous email?

BTW, my ssh key should be associated with gage package too.

--------------------------------------------
On Tue, 9/12/17, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org> wrote:

Subject: Re: problem with git / svn transition: ssh keys
To: "Luo Weijun" <luo_weijun at yahoo.com>
Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>, "Bioc-devel" <bioc-devel at r-project.org>
Date: Tuesday, September 12, 2017, 11:47 AM

Your key is in our system. It
starts with,

ssh-rsa
AAAAB3NzaC1yc2EAAAADAQABAAACAQD4+kbkP7J0rkIGy81r9fO+4tCgHzQXfkthRu/MFPE7AMvZy7SeNf9WuxPQtMeOjAl

It is associated with the
correct package ?pathview? and also ?gageData?. 

Please give me more
information to help you. Show me the exact commands you are
running. 

i.e 

    git clone git at git.bioconductor.org:packages/pathview

If that doesn?t work,
then,

    ssh -T git at git.bioconductor.org


Check out put for
?pathview? package. Please also send the email to
Bioc-devel. 

Best,

Nitesh

On Sep 12, 2017, at 11:39

AM, Luo Weijun <luo_weijun at yahoo.com>
wrote:

Nitesh,
I resubmit my ssh public key based on your

suggestion last Friday. But I still cannot git clone my
package respository. The same error remain as below. Can you
check into this?

Weijun

Cloning into

'pathview'...

key_load_public:

invalid format

Permission denied

(publickey).

fatal: Could not read from

remote repository.

Please make sure you have the correct

access rights

and the repository

exists.

--------------------------------------------

On Fri, 9/8/17, Luo Weijun <luo_weijun at yahoo.com>

wrote:

Subject:

Re: problem with git / svn transition: ssh keys

To: "NiteshTuraga" <Nitesh.Turaga at RoswellPark.org>
Cc: "MartinMorgan" <Martin.Morgan at RoswellPark.org>
Date: Friday, September 8, 2017, 12:23

PM

Nitesh,
I just submitted it. The problem is
gone indeed.
Could

you process my request and assign

me

the git access? Thanks.

Weijun

--------------------------------------------

On Fri, 9/8/17, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org>
wrote:

  Subject: Re: problem with git / svn
transition: ssh keys
  To: "Luo Weijun" <luo_weijun at yahoo.com>
  Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>
  Date: Friday, September 8, 2017,

10:31

AM

  Hi Weijun,

  I understand this was a problem
earlier on our
  end,

and it has been fixed.

  Is it still the case that it gives
the
  ?Github ID

cannot contain spaces?

error? If so,

can you

  take a screen shot and send

it to me.

I?ve tried it a few
  times and it does not give me that
error anymore.

  Nitesh

On Sep 8, 2017,

at 10:22

  AM, Luo Weijun <luo_weijun at yahoo.com>
  wrote:

Nitesh,
As I

mentioned previously, I

tried to
  submit with the prefix ssh-rsa, but

it

always complained
  that ?Github ID cannot contain
spaces? since there is a
  space following ssh-rsa. I guess it
will allow me submit if
  I remove the empty space, but would
that be a functional ssh
  key?

BTW, the

web form error?Github

  ID cannot

contain spaces? seem to

wrong as this

is ssh key

  submission.

Weijun

--------------------------------------------

On Thu, 9/7/17, Turaga, Nitesh

<Nitesh.Turaga at RoswellPark.org>
  wrote:

Subject:

Re:

problem with git / svn transition:

ssh

keys

To: "Luo Weijun"

<luo_weijun at yahoo.com>

Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>
Date: Thursday, September 7,

2017, 5:20
  PM

Hi Luo,

The key we

have on

  file is missing the

starting

`ssh-rsa`.

  Could you please resubmit?

Best,

Nitesh

On Sep

7, 2017, at 5:04 PM, Luo

Weijun
  <luo_weijun at yahoo.com>

wrote:

Just want

to make

  sure

that you see my email below. I

still

have the

same problem at this

time.

Weijun

--------------------------------------------

On Wed, 9/6/17, Luo Weijun

<luo_weijun at yahoo.com>

wrote:

Subject:

problem

  with

git / svn transition: ssh keys

  To: "NiteshTuraga" <Nitesh.Turaga at RoswellPark.org>

Cc: "Martin Morgan"

<martin.morgan at roswellpark.org>

Date: Wednesday, September 6,

2017,
  11:32

AM

Dear

Nitesh,

I submitted my ssh

keys

online

yesterday.

However, I still

cannot git clone

my

  packages

from

  github. Could you help me? Thanks!

The

error message below see to

complained

the

  public key

format. My ssh public key

looks

like:

  ssh-rsa

AAAAB3NzaC1y?.FHQ== luo_weijun at yahoo.com

but the google web form

always

complained ?Github ID

cannot
  contain

spaces?. So I

removed the

prefix and

suffix parts:

"ssh-rsa " and

  " luo_weijun at yahoo.com".

it got through after that. 
Weijun


$ git clone

git at git.bioconductor.org:packages/pathview

Cloning into

'pathview'...

key_load_public: invalid

format

Permission denied

(publickey).

fatal: Could not read from

remote

repository.

Please make sure you have

the
  correct

access rights
and the

  repository exists.



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[Bioc-devel] problem with git / svn transition: ssh keys

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