[Bioc-devel] R source code files of package vignettes
Hi Joern, One possible workaround would be to replace the dummy Rnw file by a version of the true vignette where all the code chunks are tagged with eval=FALSE. Then you would need to keep in sync 2 versions of the same file: the eval=TRUE and the eval=FALSE versions. But that can easily be achieved on Unix with a 2 line shell script using the sed command. Cheers, H.
Joern Toedling wrote:
Dear all, I would welcome your feedback on a small problem regarding vignettes. For the data package ccTutorial, I pre-build the vignettes on my machine, as building these vignettes takes considerable time. The folder 'inst/doc' only contains dummy versions of the two vignettes and a Makefile which copies the pre-built vignettes from another directory into 'doc' after running Sweave on the dummy files. I would also like to provide the source code of the pre-built vignettes in the doc directory (as these are also linked on the BioC package web page). However, having the *R files copied from the other directory into doc via use of the Makefile is pointless as it seems that the command Stangle is run on the dummy vignettes afterwards. So the source code files in the directory 'doc' only contain the non-relevant source code of the dummy files. Do you know of a way to avoid having Stangle run on the dummy files? Or is there another way to copy files afterwards? Cheers, Joern --- Joern Toedling Institut Curie -- U900 26 rue d'Ulm, 75005 Paris, FRANCE Tel. +33 (0)156246926
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