[Bioc-devel] commit changes to data packages

README.txt should be accessible in experiment/pkgs folder; attached if not
(and if not scrubbed...) ... use  a file called external_data_store.txt in
package top folder to specify which pieces come out of separate data_store
svn folder.


On Wed, Jul 11, 2012 at 12:39 PM, Vincent Carey <stvjc at channing.harvard.edu>
wrote:

alternative way.  i will find the doc.  basically there is a data_store
folder parallel to pkgs and the add_data.py utility works with that
so that software and doc can be maintained separately from voluminous
data.


On Wed, Jul 11, 2012 at 12:30 PM, Laurent Gatto <laurent.gatto at gmail.com>
wrote:

Dear all,

I have checked a complete working copy of a data package out, as
described in [1]. After updating infrastructure files (DESCRIPTION and
NEWS) and the actual data, svn status tells me the following
?       data
M       DESCRIPTION
M       NEWS
?       inst/extdata

Should I 'svn add data inst/data' and then commit, as usual, or is
there an alternative way to explicitly commit  data files to the
external data_store separately?

Thank you in advance,

Best wishes,

Laurent


[1] http://www.bioconductor.org/developers/source-control/