https://stat.ethz.ch/mailman/listinfo/bioc-devel
I guess you mean the package ISoLDE. Here's the 'build' report for
release
http://bioconductor.org/checkResults/release/bioc-LATEST/ISoLDE/zin2-buildsrc.html
and devel
http://bioconductor.org/checkResults/devel/bioc-LATEST/ISoLDE/zin1-buildsrc.html
If the vignette were being built, it would indicate that in the
Command output section.
packages using knitr need to have Suggests: knitr and VignetteBuilder:
knitr in the DESCRIPTION file; make these changes to both release and
devel branches, bumping the version as below in devel, and to 1.0.3 in
release.
Bioconductor packages are *required* to have a 'real' vignette with
evaluated code chunks; the reviewer must have missed this part of the
review process. You'll need to update your vignette to this
specification, while remaining within the size and space limitations
in the Bioconductor guidelines
http://bioconductor.org/developers/package-guidelines/#correctness
Hope that helps, please don't hesitate to ask (preferably as a
subscribed member on the Bioc-devel mailing list) for any further
assistance.
ISoLDE$ svn diff
Index: DESCRIPTION
===================================================================
--- DESCRIPTION (revision 120902)
+++ DESCRIPTION (working copy)
@@ -1,7 +1,7 @@
Package: ISoLDE
Type: Package
Title: Integrative Statistics of alleLe Dependent Expression
-Version: 1.1.2
+Version: 1.1.3
Date: 2015-10-29
Authors at R: c( person("Christelle", "Reyn?s", email =
"christelle.reynes at igf.cnrs.fr", role = c("aut","cre")),
@@ -16,6 +16,7 @@
Encoding: UTF-8
License: GPL (>= 2.0)
Depends: R (>= 3.3.0),graphics,grDevices,stats,utils
+Suggests: knitr
URL: www.r-project.org
LazyData: no
NeedsCompilation: yes
@@ -26,3 +27,4 @@
Sequencing, RNASeq, MultipleComparison, SNP,
GeneticVariability, Epigenetics, MathematicalBiology,
GeneRegulation
+VignetteBuilder: knitr
Martin
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