[Bioc-devel] [Bioc-degel] AnnotationHub needed in the description of the ExperimentHubData

There is a section in the vignette that describes what should be imported:

DESCRIPTION / NAMESPACE

The package should depend on and fully import ExperimentHub.
...

ExperimentHub depends on AnnotationHub. When ExperimentHub is loaded you
can see AnnotationHub attached to the search path with search().
read.csv is imported in AnnotationHub so adding this dependency should
take care of all the warnings you mentioned.

Are you depending on ExpermentHub?

Valerie

Hi bioc devs!

In this manual about creeating ExperimentHubData package
http://www.bioconductor.org/packages/3.4/bioc/vignettes/ExperimentHubData/inst/doc/ExperimentHubData.html
there is a suggestion to create a zzz.R file where `query` function is used.

This function comes from AnnotationHub package, so there somewhere someone
should add an information about adding AnnotationHub to Imports in
DESCRIPTION and about importing query from AnnotationHub in NAMESPACE.
Without that the CRAN CHECK results in `query is an undocumented object or
function`. What is more, I even had to add importFrom(utils, read.csv) to
the NAMESPACE, just from that reason :)

Cheers!
Marcin

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