[Bioc-devel] splitting simpleSingleCell into self-contained vignettes
Thanks for you feedback Aaron!
On Tue, Dec 12, 2017 at 9:49 PM, Aaron Lun <alun at wehi.edu.au> wrote:
Thanks Andrzej.
Thank you. I've edited the workflow index page by introducing a separate "Single-cell Workflows" section, and by substituting the previous link to your workflow by links to the individual parts.
Great, I'm looking forward to seeing it. Do you know how frequently the index page (I assume we're talking about https://bioconductor.org/help/workflows/) updates? I assume your edits haven't propagated through the system yet.
Not sure, should be online by now https://github.com/Bioconductor/bioconductor.org/commit/a60c46f0942d9825f9a643321890ba5987de109b
As discussed during EuroBioc, I'm happy to restructure the index page by grouping workflows by topic. It would be really helpful if authors would chime in to suggest the most relevant sections for their workflows.
I can chip in with two that I'm involved in: "Differential Binding from ChIP-seq data <https://bioconductor.org/help/workflows/chipseqDB/>" => ChIP-seq workflows "Gene-level RNA-seq differential expression and pathway analysis <https://bioconductor.org/help/workflows/RnaSeqGeneEdgeRQL/>" => RNA-seq workflows Of course, it depends on how granular you want the topics to be. For example, I only see one ChIP-seq workflow, so that particular section might be a bit lonely for a while (I am planning to split that into two workflows later).
Right, we should probably avoid hair-splitting. We can start with a few, say 6, and split up further according to demand as new ones are introduced. Best, Andrzej