[Bioc-devel] R-CMD-check fails on ubuntu-20.04 (release)
Hello, I?m running the following Github R-CMD-check workflow file on my package repository. https://github.com/r-lib/actions/tree/master/examples#standard-ci-workflow It passes on 3/4 operating systems ? windows-latest (release), macOS-latest (release), ubuntu-20.04 (devel) ? but fails on ubuntu-20.04 (release). I get the following error at the ?Install dependencies? section: * installing *source* package ?RCy3? ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/runner/work/_temp/Library/igraph/libs/igraph.so': libglpk.so.40: cannot open shared object file: No such file or directory Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load Execution halted ERROR: lazy loading failed for package ?RCy3? * removing ?/home/runner/work/_temp/Library/RCy3? Then this error during ?Check?: Run options(crayon.enabled = TRUE) ?? R CMD build ????????????????????????????????????????????????????????????????? * checking for file ?/home/runner/work/FEDUP/FEDUP/DESCRIPTION? ... OK * preparing ?FEDUP?: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes ----------------------------------- ERROR: dependency ?RCy3? is not available for package ?FEDUP? * removing ?/tmp/RtmpQdTGMd/Rinst3f8b26ef4bf5/FEDUP? ----------------------------------- ERROR: package installation failed Error: Error in proc$get_built_file() : Build process failed Calls: <Anonymous> ... build_package -> with_envvar -> force -> <Anonymous> Execution halted Error: Process completed with exit code 1. I run into no issues when running devtools::check() locally on my system (macOS Big Sur 11.2). Any ideas on how to fix this issue? Thanks, Catherine