[Bioc-devel] Bug in DEXSeq, me thinks
And then add names back to muhats, of course: On Mon, Mar 12, 2012 at 8:32 PM, Steve Lianoglou
<mailinglist.honeypot at gmail.com> wrote:
Hi,
It just so happened that DEXSeq, for reasons I couldn't explain, kept
throwing errors during a call to `estimateDispersions`. I couldn't
explain it because I really thought I didn't change much, but I've got
some magic combination of samples I'm currently trying to
estimateDispersion on that none of them throw any errors while
estimate `muhats` (line 245 of core_functions.R):
muhats <- sapply(testablegenes, function(gn) {
...
muhat
})
[snip] names(muhats) <- testablegenes -steve
Steve Lianoglou Graduate Student: Computational Systems Biology ?| Memorial Sloan-Kettering Cancer Center ?| Weill Medical College of Cornell University Contact Info: http://cbio.mskcc.org/~lianos/contact