[Bioc-devel] OpenMP on OS X
On 04/15/2016 11:28 AM, Vincent Carey wrote:
other packages use #ifdef _OPENMP #include <omp.h> #endif have you tried that?
And additional details at https://cran.r-project.org/doc/manuals/r-release/R-exts.html#OpenMP-support
On Fri, Apr 15, 2016 at 11:21 AM, Aaron Taudt <aaron.taudt at gmail.com> wrote:
Hi,
I am using openmp support in my C++ code and it builds just fine on Windows
and Linux. The morelia build output for OS X however yields the following
error:
In file included from ./R_interface.h:5:
./scalehmm.h:16:10: fatal error: 'libiomp/omp.h' file not found
#include <libiomp/omp.h> // parallelization options on mac
^
1 error generated.
I use the following code to include the omp.h for OS X:
#if defined TARGET_OS_MAC || defined __APPLE__
#include <libiomp/omp.h> // parallelization options on mac
#elif defined __linux__ || defined _WIN32 || defined _WIN64
#include <omp.h> // parallelization options
#endif
What is the correct way to enable the openMP support for OS X?
Regards,
Aaron
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