[Bioc-devel] Hsapiens in bioconductor
Dear bioc-devel, I would like to import Hsapiens objects from both BSgenome.Hsapiens.UCSC.hg19 and BSgenome.Hsapiens.UCSC.hg38 this is currently handled in the namespace of my package by import(BSgenome.Hsapiens.UCSC.hg19) import(BSgenome.Hsapiens.UCSC.hg38) I get warning (because I assign two different genomes to Hsapiens variable): Warning: replacing previous import ?BSgenome.Hsapiens.UCSC.hg19::Hsapiens? by ?BSgenome.Hsapiens.UCSC.hg38::Hsapiens? when loading ?RareVariantVis? Could you suggest how to avoid this warning? I would like to use both hg19 and hg38 references in my package. Packages are listed in my Description file under Imports:. Furthermore, I use them as BSgenome.Hsapiens.UCSC.hg38::Hsapiens in my code. Kind regards,
Tomasz Stokowy Phd Senior Engineer Department of Clinical Science University of Bergen, Norway