Maybe it's related to:
* The plot() S3 generic function is now in package base rather than
package graphics, as it is reasonable to have methods that do not use
the graphics package. The generic is currently re-exported from the
graphics namespace to allow packages importing it from there to
continue working, but this may change in future.
mentioned in the R 4.0.0 NEWS
(https://cran.r-project.org/doc/manuals/r-devel/NEWS.html)?
/Henrik
On Mon, Mar 16, 2020 at 3:52 PM Vincent Carey
<stvjc at channing.harvard.edu> wrote:
I just updated my R and I am getting into trouble with MLInterfaces
maintenance.
BiocManager::install("MLInterfaces")
'*
*Content type 'application/x-gzip' length 1071876 bytes (1.0 MB)*
*==================================================*
*downloaded 1.0 MB*
* installing *source* package ?MLInterfaces? ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in getGeneric(f, TRUE, envir, package) :
no generic function found for ?plot?
Calls: <Anonymous> ... namespaceImportFrom -> .mergeImportMethods ->
<Anonymous> -> getGeneric
recover called non-interactively; frames dumped, use debugger() to view
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ?MLInterfaces? in
TRUE, envir, package):
no generic function found for ?plot?
...
R Under development (unstable) (2020-03-15 r77975)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Mojave 10.14.6
Matrix products: default
BLAS:
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.0.dylib
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] rmarkdown_2.1
loaded via a namespace (and not attached):
[1] BiocManager_1.30.10 compiler_4.0.0 startup_0.14.0
[4] tools_4.0.0 htmltools_0.4.0 Rcpp_1.0.3
[7] codetools_0.2-16 knitr_1.28 xfun_0.12
[10] digest_0.6.25 rlang_0.4.5 evaluate_0.14
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