[Bioc-devel] library(Biostrings) gives me an error
Hi Pierre,
Pierre-Yves wrote:
Dear list, I am facing the following error and google is quite quiet to help me.\ Has anyone seen it before ? Note that I have the dependencies list on the website installed (I can send my library() is needed). Thanks for your help, Best regards, Pierre
library(Biostrings)
Loading required package: IRanges Attaching package: 'IRanges' The following object(s) are masked from package:base : cbind, duplicated, order, pmax, pmax.int, pmin, pmin.int, rank, rbind, rep.int, sapply, sort, table, unique Error in insertMethod(m1, as.character(sigi), args, el(methods, i), FALSE) : inserting method with invalid signature matching argument '...' to class "ANY" In addition: Warning messages: 1: Multiple methods tables found for 'score' 2: Multiple methods tables found for 'substr' 3: Multiple methods tables found for 'substring' 4: Multiple methods tables found for 'chartr' Error: package/namespace load failed for 'Biostrings'
sessionInfo()
R version 2.8.1 (2008-12-22) x86_64-redhat-linux-gnu locale: LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] IRanges_1.1.55
This is a development version of IRanges in a release version of R. If you want to run development versions of packages, then use a devel version of R. And regardless of the R version you use, install packages using biocLite() so you get the correct package version for the R you are using. Best, Jim
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