[Bioc-devel] Problem loading Rdbi (again)
Hi Benno,
Benno Puetz wrote:
After successfully installing and using Rdbi (1.12.0, on R 2.6.0) yesterday, I started getting error messages when trying to load the library today (... cyclic dependencies ...).
On my system 'library(Rdbi)' is desperately quiet ;-) It's hard to believe that Rdbi has a circular dep problem since it depends on nothing except R >= 1.2. What message do you get _exactly_? and after doing what? Please show us the full session. Also, we need your sessionInfo(). Here is mine:
sessionInfo()
R version 2.6.0 (2007-10-03) x86_64-unknown-linux-gnu locale: LC_CTYPE=en_US;LC_NUMERIC=C;LC_TIME=en_US;LC_COLLATE=en_US;LC_MONETARY=en_US;LC_MESSAGES=en_US;LC_PAPER=en_US;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US;LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] Rdbi_1.12.0 loaded via a namespace (and not attached): [1] rcompgen_0.1-17 tools_2.6.0 Cheers, H.
I am not aware of any change to the system that might have triggered this.
Checking the archives I found this problem mentioned quite some time
ago, but no explicit solution.
Removing the library and freshly installing from Bioconductor did not
change anything. This is the only version of Rdbi found on my system.
Any suggestions towards a solution would be welcome
Benno