Hi, The tabular files with the Bioconductor package statistics seem broken right now. For example, http://bioconductor.org/packages/stats/bioc/recount/ links to http://bioconductor.org/packages/stats/bioc/recount/recount_stats.tab which right now redirects to a "page not found" message at http://bioconductor.org/packages/stats/bioc/recount/recount_stats.tab/ (trailing slash). I noticed this when I wanted to add the new GenomicState pkg to my CV using this R code https://github.com/lcolladotor/cv/blob/gh-pages/en_CV_lcollado.Rnw#L87-L96. At http://bioconductor.org/packages/release/data/annotation/html/GenomicState.html the link to http://bioconductor.org/packages/stats/data-annotation/GenomicState/ (from the rank badge) returns an "Access Forbidden" result. Best, Leo
[Bioc-devel] package download stats seem unavailable
3 messages · Hervé Pagès, Leonardo Collado Torres
Hi Leonardo, The download stats are temporarily unavailable and should be back tomorrow (as discussed last week on the community-bioc Slack, #general channel). Thanks for your patience, H.
On 11/11/19 10:23, Leonardo Collado Torres wrote:
Hi, The tabular files with the Bioconductor package statistics seem broken right now. For example, https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=-BdPEdtYLADOzfp_U4VQlSYBQSa2s6RI-bovMie-tqQ&e= links to https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_recount-5Fstats.tab&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=vmqUUMoSwSUY-T6XNDObItzsiwQF5ypZiPDUHZJFdoA&e= which right now redirects to a "page not found" message at https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_recount-5Fstats.tab_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=emHwGn6PRbXt8ooFXtmph_Qo6Q_yiZtns8S76AdTegk&e= (trailing slash). I noticed this when I wanted to add the new GenomicState pkg to my CV using this R code https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_lcolladotor_cv_blob_gh-2Dpages_en-5FCV-5Flcollado.Rnw-23L87-2DL96&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=2et8LWo_FJxTaoaapOWldNpzTq7VqFgUu5vSjH7rOzo&e= . At https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_release_data_annotation_html_GenomicState.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=z_7YilykLuxnL4uVyhKd6r1IorqRusOv4al7hZK1cWM&e= the link to https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_data-2Dannotation_GenomicState_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=sF1DuzbvLkqkyzWFL1VhKDEKN7-fX7JJ91t9dbU4qM4&e= (from the rank badge) returns an "Access Forbidden" result. Best, Leo [[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=imTISDYJBYS5wbRH9D8EUoa812Py7ILj1-5L6oZiJEs&e=
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319
6 days later
Oops, I'm behind on my BioC Slack updates! Thanks for the reminder hehe
On Mon, Nov 11, 2019 at 8:18 PM Pages, Herve <hpages at fredhutch.org> wrote:
Hi Leonardo, The download stats are temporarily unavailable and should be back tomorrow (as discussed last week on the community-bioc Slack, #general channel). Thanks for your patience, H. On 11/11/19 10:23, Leonardo Collado Torres wrote:
Hi, The tabular files with the Bioconductor package statistics seem broken right now. For example,
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=-BdPEdtYLADOzfp_U4VQlSYBQSa2s6RI-bovMie-tqQ&e= links
to
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_recount-5Fstats.tab&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=vmqUUMoSwSUY-T6XNDObItzsiwQF5ypZiPDUHZJFdoA&e=
which right now redirects to a "page not found" message at
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_bioc_recount_recount-5Fstats.tab_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=emHwGn6PRbXt8ooFXtmph_Qo6Q_yiZtns8S76AdTegk&e=
(trailing slash). I noticed this when I wanted to add the new GenomicState pkg to my CV
using
this R code
https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_lcolladotor_cv_blob_gh-2Dpages_en-5FCV-5Flcollado.Rnw-23L87-2DL96&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=2et8LWo_FJxTaoaapOWldNpzTq7VqFgUu5vSjH7rOzo&e= .
At
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_release_data_annotation_html_GenomicState.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=z_7YilykLuxnL4uVyhKd6r1IorqRusOv4al7hZK1cWM&e=
the link to
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_stats_data-2Dannotation_GenomicState_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=sF1DuzbvLkqkyzWFL1VhKDEKN7-fX7JJ91t9dbU4qM4&e=
(from the rank badge) returns an "Access Forbidden" result.
Best,
Leo
[[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=upAr-KEcnpFYUqm1Zf56rGah86iEEUKm3UOL6qHiNw0&s=imTISDYJBYS5wbRH9D8EUoa812Py7ILj1-5L6oZiJEs&e=
-- Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319