Hello all arabidopsis developers, In the arabidopsis chip annotation packages (for an example see ath1121501.db <http://www.bioconductor.org/packages/2.3/data/annotation/html/ath1121501.db.html>), there are two mappings that show the relationship between the probe and the internal gene ID. For some probes, there are multiple genes that map to a probe, and so for these cases, looking in the ACCNUM mapping will give you the answer "multiple" instead of an ID. For these same multiple hit cases, looking in the MULTIHIT mapping will give several IDs. We would like to do away with MULTIHIT, and instead just have the ACCNUM return several IDs when several IDs are appropriate. But we don't want to break anyones world by making changes without consulting you 1st. So now is your chance to let us know if this change is unacceptable to you. If you prefer that things stay the same, please speak up so we can know about it. Thanks in advance for your input, Marc
[Bioc-devel] proposed change to arabidopsis mappings for arabidopsis chip annotation packages.
1 message · Marc Carlson