Hi,
I am the maintainer of the package ?CLIProfiler?. I received an error message for the check step on Linux system. The error message is
?? Error ('test_motifProfile.R:9:5'): motifProfile works as expected ???????????
Error in `.stopOnAvailablePkg(genome)`: BSgenome.Mmusculus.UCSC.mm10 package is not currently installed.
You first need to install it, which you can do with:
library(BiocManager)
install("BSgenome.Mmusculus.UCSC.mm10")
I think this is due to the package BSgenome.Mmusculus.UCSC.mm10 is not installed on the test machine for the Linux system. So I was wondering if you could help me to check whether the package BSgenome.Mmusculus.UCSC.mm10 has installed on that machine. Thanks in advance.
Best regards,
You Zhou
[Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17
2 messages · You Zhou, Shepherd, Lori
Is this ERROR happening consistently or is it new? I just went onto the builder and it is installed so perhaps it was intermittent that now is remedied? Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of You Zhou <you.zhou at bmls.de>
Sent: Monday, April 3, 2023 12:58 PM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17
Sent: Monday, April 3, 2023 12:58 PM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17
Hi,
I am the maintainer of the package “CLIProfiler”. I received an error message for the check step on Linux system. The error message is
── Error ('test_motifProfile.R:9:5'): motifProfile works as expected ───────────
Error in `.stopOnAvailablePkg(genome)`: BSgenome.Mmusculus.UCSC.mm10 package is not currently installed.
You first need to install it, which you can do with:
library(BiocManager)
install("BSgenome.Mmusculus.UCSC.mm10")
I think this is due to the package BSgenome.Mmusculus.UCSC.mm10 is not installed on the test machine for the Linux system. So I was wondering if you could help me to check whether the package BSgenome.Mmusculus.UCSC.mm10 has installed on that machine. Thanks in advance.
Best regards,
You Zhou
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