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[Bioc-devel] pre-receive hook declined

5 messages · Victor Yuan, Vincent Carey, Nitesh Turaga +1 more

Original
Victor Yuan
# 
Hi I cannot seem to push to the remote git at git.bioconductor.org:
packages/GSE159526

I get a "pre-receive hook declined" error:

####
$ git push upstream master
Enumerating objects: 21, done.
Counting objects: 100% (21/21), done.
Delta compression using up to 12 threads
Compressing objects: 100% (15/15), done.
Writing objects: 100% (15/15), 1.55 KiB | 1.55 MiB/s, done.
Total 15 (delta 9), reused 0 (delta 0), pack-reused 0
remote: Traceback (most recent call last):
remote:   File "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
line 89, in <module>
remote:     apply_hooks(hooks_dict)
remote:   File "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
line 71, in apply_hooks
remote:     if hooks_dict["pre-receive-hook-merge-markers"]:  # enable hook
remote: KeyError: 'pre-receive-hook-merge-markers'
To git.bioconductor.org:packages/GSE159526
 ! [remote rejected] master -> master (pre-receive hook declined)
error: failed to push some refs to 'git.bioconductor.org:packages/GSE159526'
####

I checked, and my ssh keys are configured correctly.

https://github.com/Bioconductor/Contributions/issues/2170

Any help appreciated!
Victor
Vincent Carey
# 
are you using wvictor14
On Wed, Jun 30, 2021 at 1:41 PM Victor Yuan <victor.2wy at gmail.com> wrote:

            

      
      
      
    

        

      
      
    

        

  
    

      
      
    

  


  


      

    

    

      
      

        


  

        

      Nitesh Turaga
    

    

      
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Hi,


Can you please try again??


It seems a minor issue on our end, which I just fixed.

Best,

Nitesh 

Nitesh Turaga
Scientist II, Department of Data Science,
Bioconductor Core Team Member
Dana Farber Cancer Institute

            

      
      
      
    

        

      
      
    

  
  


  


      

    

    

      
      

        


  

        

      Victor Yuan
    

    

      
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I still get the same error @Nitesh!

I also just tried switching my user email to my academic email (which is
what's listed in my package) but that had no effect.

On Wed, Jun 30, 2021 at 10:55 AM Nitesh Turaga <nturaga.bioc at gmail.com>
wrote:

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

  
  


  


      

    

    

      
      

        


  

        

      Hui "Sheen" Yu
    

    

      
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I also encountered a similar error when I tried pushing to MetaGSCA on
Bioconductor.org.

git push upstream master --force
##### After some seemingly normal messages ###########333
remote: FATAL: + refs/heads/master packages/MetaGSCA hui-sheen DENIED by
fallthru
remote: error: hook declined to update refs/heads/master
To git at git.bioconductor.org:packages/MetaGSCA.git
! [remote rejected] master -> master (hook declined)
error: failed to push some refs to 'git at git.bioconductor.org
:packages/MetaGSCA.git'

On Wed, Jun 30, 2021 at 11:54 AM Vincent Carey <stvjc at channing.harvard.edu>
wrote: