This is probably my error or misunderstanding.
That admitted, I cannot figure out why version 1.11.2 of the igvR package has not been picked up in the daily devel builds.
I *think* my commits were done properly, as this fresh clone from bioc master shows:
cd /tmp
git clone git at git.bioconductor.org:packages/igvR
grep Version igvR/DESCRIPTION
Version: 1.11.2
Yet https://www.bioconductor.org/packages/devel/bioc/html/igvR.html shows version 1.11.0
Advice and suggestions welcome!
- Paul
[Bioc-devel] latest devel version of igvR - apparently not picked up by the build system
2 messages · Paul Shannon, Shepherd, Lori
There are a number of things that could be the possible cause... Firstly, on the Bioconductor end, it looks like the devel build report has not been updated since Friday as indicated by the date at the top of this page: http://bioconductor.org/checkResults/3.13/bioc-LATEST/ This page gives some information about the delay that could occur between pushing to bioconductor, the build process, build report posting, and landing page updated. http://bioconductor.org/developers/how-to/troubleshoot-build-report/ It looks like you pushed changes Sunday so it would be possible that the changes would not show up until Tuesday's report if the changes were pushed too late to be included for the monday build. hope this helps. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Paul Shannon <paul.thurmond.shannon at gmail.com>
Sent: Tuesday, November 3, 2020 11:02 AM
To: Bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] latest devel version of igvR - apparently not picked up by the build system
Sent: Tuesday, November 3, 2020 11:02 AM
To: Bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] latest devel version of igvR - apparently not picked up by the build system
This is probably my error or misunderstanding.
That admitted, I cannot figure out why version 1.11.2 of the igvR package has not been picked up in the daily devel builds.
I *think* my commits were done properly, as this fresh clone from bioc master shows:
cd /tmp
git clone git at git.bioconductor.org:packages/igvR
grep Version igvR/DESCRIPTION
Version: 1.11.2
Yet https://secure-web.cisco.com/10RZiv-8ZM3QD_qBKV-bcw5nTomXwhKLnl-8B-HUmK0X1k-evS6OJoaEzTGIsWDgP1ntcAM-DFAtrXQXPy24cnJ_wq35AQhtQYIYmBiTv5pS7woeMK4n8rlJfLWQXNsyWSYIityi1xe_eUktMrB1pREjPA_KF3aklcUEFmxIN4dFzaL6UHdDAAmyCIBr3wdBuAyyvwLFae8oexWkaa9WFbfRfZBFcahq7Focb_yjRnSfkHytihfvKYzbo1aYSwBkx0MJxEvPOp6xrsTi14HF2hXjrUBzh2ae1OUEgswilz7gTLdZMIknzjys3nEIwNlmx/https%3A%2F%2Fwww.bioconductor.org%2Fpackages%2Fdevel%2Fbioc%2Fhtml%2FigvR.html shows version 1.11.0
Advice and suggestions welcome!
- Paul
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