Hi, SeqArray is failing to build on nebbiolo1, with the error Quitting from SeqArray.Rmd:293-299 [unnamed-chunk-11] Error in `seqAsVCF()`: ! Please install VariantAnnotation to use this function It looks like VariantAnnotation is passing its own builds, so I don't understand why this error is happening. Is it related to the ordering of package builds? One potential fix could be to add VariantAnnotation to VignetteDepends, but it's already in Suggests which implies that it should be installed prior to building the vignette, right? thanks, Stephanie Gogarten
Stephanie M. Gogarten, PhD Senior Research Scientist / Genetic Analysis Center <https://www.biostat.washington.edu/research/centers/gac> Department of Biostatistics <https://www.biostat.washington.edu/> UNIVERSITY OF WASHINGTON UW Tower Box 359461 4333 Brooklyn Ave NE, Seattle, WA 98195 206.221.0757 sdmorris at uw.edu she/her/hers [[alternative HTML version deleted]]