[Bioc-devel] ggbio: gridExtra 2.0.0 breaks import

Thanks Julian, and thanks a lot Dan for the quick fix,

Sorry this email went to archives automatically with a list of other issues
... but I will check to see if it need more update/fix.

best

On Thu, Jul 16, 2015 at 1:08 PM, Dan Tenenbaum <dtenenba at fredhutch.org>
wrote:

----- Original Message -----

From: "Julian Gehring" <julian.gehring at embl.de>
To: bioc-devel at r-project.org
Sent: Thursday, July 16, 2015 2:22:53 AM
Subject: [Bioc-devel] ggbio:  gridExtra 2.0.0 breaks import

Hi,

It seems that 'ggbio' is affected by the major rewrite of 'gridExtra'
(2.0.0) that was released a few days ago
(http://cran.r-project.org/web/packages/gridExtra/news.html).

  library(ggbio)

yields

  Error : object ?latticeGrob? is not exported by
  'namespace:gridExtra'
  Error: package or namespace load failed for ?ggbio?

after upgrading 'gridExtra'. Please note that this also affects the
release branch.

Relevant versions:
- R :: 3.2.1
- ggbio :: 1.16.0
- gridExtra :: 2.0.0

I'm not the maintainer of ggbio but I did just check in a fix for this in
release and devel.
Dan

Best wishes
Julian

_______________________________________________
Bioc-devel at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

_______________________________________________
Bioc-devel at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Tengfei Yin, PhD
Product Manager
Seven Bridges Genomics
sbgenomics.com
One Broadway FL 7
Cambridge, MA 02142
(617) 866-0446

	[[alternative HTML version deleted]]

Hi Dan,
Thanks you for the very quick fix!
Best wishes
Julian

----- Original Message -----
From: "Julian Gehring" 
To: bioc-devel at r-project.org (mailto:bioc-devel at r-project.org)
Sent: Thursday, July 16, 2015 2:22:53 AM
Subject: [Bioc-devel] ggbio:  gridExtra 2.0.0 breaks import

Hi,

It seems that 'ggbio' is affected by the major rewrite of 'gridExtra'
(2.0.0) that was released a few days ago
(http://cran.r-project.org/web/packages/gridExtra/news.html (http://cran.r-project.org/web/packages/gridExtra/news.html)).

library(ggbio)

yields

Error : object ?latticeGrob? is not exported by
'namespace:gridExtra'
Error: package or namespace load failed for ?ggbio?

after upgrading 'gridExtra'. Please note that this also affects the
release branch.

Relevant versions:
- R :: 3.2.1
- ggbio :: 1.16.0
- gridExtra :: 2.0.0

I'm not the maintainer of ggbio but I did just check in a fix for this in release and devel.
Dan

Best wishes
Julian

_______________________________________________
Bioc-devel at r-project.org (mailto:Bioc-devel at r-project.org) mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel (https://stat.ethz.ch/mailman/listinfo/bioc-devel)